Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 SNORA78-201ENST00000459373 127 ntBASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 AC111152.3-201ENST00000569699 673 ntBASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 GPR32P1-201ENST00000601788 811 ntBASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LINC00554-201ENST00000564841 3011 ntBASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
LINC01561Q8N1V8 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 MIR662-201ENST00000384847 95 ntBASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 AC103564.2-201ENST00000432853 1299 ntBASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 AC122714.2-201ENST00000502787 707 ntBASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 ZNF444P1-201ENST00000559497 298 ntBASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 AL603756.1-201ENST00000606511 2163 ntBASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 UBALD1-205ENST00000590891 2641 ntBASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
LINC01561Q8N1V8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 LINC01568-207ENST00000641790 1380 ntBASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 MIR4497-201ENST00000583208 89 ntBASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.67□□□□□ -0.54
LINC01561Q8N1V8 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms