Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 RPS2P1-201ENST00000434010 821 ntBASIC16.62■□□□□ 0.25
RAB43Q86YS6 HNRNPDP1-201ENST00000439535 754 ntBASIC16.62■□□□□ 0.25
RAB43Q86YS6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 AC116407.3-201ENST00000623905 1129 ntBASIC16.62■□□□□ 0.25
RAB43Q86YS6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 AC134043.2-201ENST00000624206 2238 ntBASIC16.62■□□□□ 0.25
RAB43Q86YS6 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 AC012317.2-201ENST00000623305 2251 ntBASIC16.62■□□□□ 0.25
RAB43Q86YS6 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
RAB43Q86YS6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RAB43Q86YS6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 AC093010.1-201ENST00000473625 1624 ntBASIC16.61■□□□□ 0.25
RAB43Q86YS6 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 AC096633.1-201ENST00000422446 749 ntBASIC16.61■□□□□ 0.25
RAB43Q86YS6 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 AC122714.2-201ENST00000502787 707 ntBASIC16.61■□□□□ 0.25
RAB43Q86YS6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RAB43Q86YS6 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
RAB43Q86YS6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 KRT18P13-201ENST00000400056 1290 ntBASIC16.6■□□□□ 0.25
RAB43Q86YS6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 TERC-201ENST00000602385 541 ntBASIC16.6■□□□□ 0.25
RAB43Q86YS6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.6■□□□□ 0.25
RAB43Q86YS6 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RAB43Q86YS6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RAB43Q86YS6 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms