Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
VRK2Q86Y07 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
VRK2Q86Y07 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.06■□□□□ 0.16
VRK2Q86Y07 AL353593.2-201ENST00000602529 1483 ntBASIC16.06■□□□□ 0.16
VRK2Q86Y07 IER3-202ENST00000376377 1350 ntBASIC16.06■□□□□ 0.16
VRK2Q86Y07 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 TPSP2-201ENST00000561760 610 ntBASIC16.06■□□□□ 0.16
VRK2Q86Y07 AP002414.4-201ENST00000589764 1148 ntBASIC16.06■□□□□ 0.16
VRK2Q86Y07 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 AL590326.2-201ENST00000625139 305 ntBASIC16.06■□□□□ 0.16
VRK2Q86Y07 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.06■□□□□ 0.16
VRK2Q86Y07 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
VRK2Q86Y07 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 TP73-AS1-210ENST00000637775 1455 ntBASIC16.05■□□□□ 0.16
VRK2Q86Y07 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 TOB2P1-201ENST00000469761 992 ntBASIC16.05■□□□□ 0.16
VRK2Q86Y07 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 AC011467.2-201ENST00000598425 242 ntBASIC16.05■□□□□ 0.16
VRK2Q86Y07 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 OR6D1P-203ENST00000641209 4860 ntBASIC16.05■□□□□ 0.16
VRK2Q86Y07 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
VRK2Q86Y07 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
VRK2Q86Y07 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 AC005915.1-201ENST00000624912 2018 ntBASIC16.04■□□□□ 0.16
VRK2Q86Y07 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
VRK2Q86Y07 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.04■□□□□ 0.16
VRK2Q86Y07 STK19B-204ENST00000512515 211 ntBASIC16.04■□□□□ 0.16
VRK2Q86Y07 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms