Protein–RNA interactions for Protein: Q86TM6

SYVN1, E3 ubiquitin-protein ligase synoviolin, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1Q86TM6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SYVN1Q86TM6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.08■□□□□ 0.33
SYVN1Q86TM6 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
SYVN1Q86TM6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SYVN1Q86TM6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYVN1Q86TM6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYVN1Q86TM6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SYVN1Q86TM6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.08■□□□□ 0.33
SYVN1Q86TM6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 AC010460.3-201ENST00000511359 1579 ntBASIC17.08■□□□□ 0.32
SYVN1Q86TM6 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 SLC25A6P4-201ENST00000586535 553 ntBASIC17.08■□□□□ 0.32
SYVN1Q86TM6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 REXO1L6P-202ENST00000619970 1078 ntBASIC17.08■□□□□ 0.32
SYVN1Q86TM6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 AC084018.2-201ENST00000613093 2607 ntBASIC17.08■□□□□ 0.32
SYVN1Q86TM6 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SYVN1Q86TM6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.07■□□□□ 0.32
SYVN1Q86TM6 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 AL139327.4-201ENST00000612362 153 ntBASIC17.07■□□□□ 0.32
SYVN1Q86TM6 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.07■□□□□ 0.32
SYVN1Q86TM6 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYVN1Q86TM6 AKR1C7P-201ENST00000305623 895 ntBASIC17.06■□□□□ 0.32
SYVN1Q86TM6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms