Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 PIN1P1-201ENST00000412108 996 ntBASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ATP5G2P4-201ENST00000442175 420 ntBASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
VPS13BQ7Z7G8 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 CD81-202ENST00000381036 880 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 DDT-204ENST00000404092 805 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 HNRNPRP1-201ENST00000453465 1695 ntBASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 AC009477.1-201ENST00000452936 217 ntBASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
VPS13BQ7Z7G8 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.71
VPS13BQ7Z7G8 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 AL358472.5-202ENST00000641448 1267 ntBASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 SSH2-211ENST00000590153 570 ntTSL 4 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 TP53TG3HP-202ENST00000569755 579 ntBASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC10.58□□□□□ -0.72
VPS13BQ7Z7G8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms