Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 AL139288.1-201ENST00000623748 933 ntBASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 TP73-AS1-207ENST00000624167 988 ntBASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LYSMD3Q7Z3D4 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 AL121912.1-201ENST00000603683 238 ntBASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 AL031008.1-201ENST00000619963 541 ntBASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LYSMD3Q7Z3D4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 SIGLEC30P-201ENST00000455569 941 ntBASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 AL160237.2-201ENST00000556165 472 ntBASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 AC080080.1-201ENST00000625121 2420 ntBASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LYSMD3Q7Z3D4 AL135999.2-201ENST00000622438 1686 ntBASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 SCARNA2-201ENST00000458748 420 ntBASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 AC104692.2-201ENST00000603054 253 ntBASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.42■□□□□ 0.38
LYSMD3Q7Z3D4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms