Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 SPDYE13P-201ENST00000445314 798 ntBASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 AC069148.1-201ENST00000608741 768 ntBASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 AC093458.2-201ENST00000623150 629 ntBASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PDZRN4Q6ZMN7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 SEC1P-202ENST00000473944 940 ntBASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 AC112497.1-201ENST00000624824 639 ntBASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PDZRN4Q6ZMN7 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 RCC2P3-201ENST00000418112 1537 ntBASIC20.02■□□□□ 0.79
PDZRN4Q6ZMN7 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 KRT18P56-201ENST00000507275 550 ntBASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 AL136379.1-201ENST00000623471 2642 ntBASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC20.01■□□□□ 0.79
PDZRN4Q6ZMN7 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC20■□□□□ 0.79
PDZRN4Q6ZMN7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20■□□□□ 0.79
PDZRN4Q6ZMN7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC20■□□□□ 0.79
PDZRN4Q6ZMN7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
PDZRN4Q6ZMN7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20■□□□□ 0.79
PDZRN4Q6ZMN7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDZRN4Q6ZMN7 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms