Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 UNC93B6-202ENST00000528242 690 ntBASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 SLC25A1P1-201ENST00000528351 927 ntBASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 AC106730.1-201ENST00000566722 1090 ntBASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 AC008667.4-201ENST00000607370 168 ntBASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 Z83851.2-201ENST00000609564 659 ntBASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 AL590787.1-201ENST00000568856 1315 ntBASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRAT1Q6PJG6 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 AC104109.2-201ENST00000602919 1418 ntBASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 AF228730.7-201ENST00000641842 219 ntBASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRAT1Q6PJG6 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 AC020916.1-201ENST00000587762 1774 ntBASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
BRAT1Q6PJG6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 PTCHD3P3-201ENST00000403073 906 ntBASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 AP000347.1-202ENST00000435868 847 ntBASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 IGHV3-65-201ENST00000523210 341 ntBASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 GGTLC5P-201ENST00000617623 998 ntBASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
BRAT1Q6PJG6 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
BRAT1Q6PJG6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.32■□□□□ 0.36
BRAT1Q6PJG6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
BRAT1Q6PJG6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.32■□□□□ 0.36
BRAT1Q6PJG6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.32■□□□□ 0.36
BRAT1Q6PJG6 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms