Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 AC236430.1-201ENST00000402231 743 ntBASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 DUX4L17-201ENST00000557360 1267 ntBASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 AL139327.4-201ENST00000612362 153 ntBASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD4Q5XG99 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 SLC25A24-204ENST00000569674 2357 ntBASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 FLJ13224-201ENST00000313737 1514 ntBASIC16.91■□□□□ 0.3
LYSMD4Q5XG99 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 SPCS2P4-201ENST00000436160 681 ntBASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 AC002472.2-201ENST00000442739 958 ntBASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 TSPY16P-201ENST00000449843 468 ntBASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD4Q5XG99 AC063926.2-201ENST00000623766 1308 ntBASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms