Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 AL138688.1-201ENST00000624851 1594 ntBASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 KRT8P10-201ENST00000450021 1447 ntBASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 SIGLEC16-201ENST00000599858 1437 ntBASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 AC003669.1-201ENST00000334569 611 ntBASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 AC073592.4-201ENST00000623827 446 ntBASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 AC073592.5-201ENST00000624854 528 ntBASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.1■□□□□ 0.49
TTC39BQ5VTQ0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 AC133963.1-201ENST00000504166 1679 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 AC099398.1-201ENST00000567919 2776 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 AC079776.2-201ENST00000641154 1609 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 AD000864.1-201ENST00000624076 2295 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 AC073648.2-201ENST00000510116 352 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 AC109462.3-201ENST00000573934 613 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 LINC01451-201ENST00000623792 534 ntBASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TTC39BQ5VTQ0 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 AP001094.4-201ENST00000579008 2176 ntBASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TTC39BQ5VTQ0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 KLF4P1-201ENST00000412782 1185 ntBASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 SPDYE21P-201ENST00000413323 827 ntBASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 KRT18P67-201ENST00000432816 1264 ntBASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 AF186996.4-201ENST00000467186 377 ntBASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 TP73-AS1-207ENST00000624167 988 ntBASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TTC39BQ5VTQ0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TTC39BQ5VTQ0 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms