Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PRPF38BQ5VTL8 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AL365330.1-201ENST00000607459 531 ntBASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 WNT11-204ENST00000621122 789 ntTSL 5 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AL590787.1-201ENST00000568856 1315 ntBASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 SLC7A15P-201ENST00000424028 1363 ntBASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.63■□□□□ 0.57
PRPF38BQ5VTL8 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 AC055876.2-201ENST00000531834 546 ntBASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.62■□□□□ 0.57
PRPF38BQ5VTL8 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 AC005229.1-201ENST00000392885 409 ntBASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 NUS1P3-201ENST00000423502 862 ntBASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 SLC25A6P2-201ENST00000497974 877 ntBASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 ZNF767P-206ENST00000513792 565 ntBASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 MIR4515-201ENST00000584082 81 ntBASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 STK25P1-201ENST00000585406 838 ntBASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 AL009183.1-201ENST00000603760 355 ntBASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PRPF38BQ5VTL8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms