Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
CDC42BPAQ5VT25 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 AL355312.1-201ENST00000407115 2176 ntBASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 AC005225.4-201ENST00000557330 545 ntBASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 AL354751.1-201ENST00000412768 1863 ntBASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC25.92■■□□□ 1.74
CDC42BPAQ5VT25 AC016027.1-202ENST00000607927 1699 ntBASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 METTL26-204ENST00000397665 558 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 SPDYE7P-202ENST00000420373 878 ntBASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 TAF8-206ENST00000472818 719 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AC004890.2-204ENST00000481968 304 ntBASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AC091167.2-201ENST00000579581 588 ntBASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 AC008267.7-201ENST00000624570 1194 ntBASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
CDC42BPAQ5VT25 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 AC104581.1-202ENST00000635932 2618 ntBASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 TSSK5P-201ENST00000423978 907 ntBASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC25.9■■□□□ 1.74
CDC42BPAQ5VT25 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 HARS-204ENST00000438307 1789 ntTSL 2 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC25.89■■□□□ 1.74
CDC42BPAQ5VT25 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
CDC42BPAQ5VT25 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
CDC42BPAQ5VT25 SATB1-217ENST00000493952 626 ntTSL 3 BASIC25.88■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms