Protein–RNA interactions for Protein: Q4ZHG4

FNDC1, Fibronectin type III domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 1,894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1Q4ZHG4 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 SLC25A6P5-201ENST00000435663 894 ntBASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 FAM86GP-201ENST00000448322 971 ntBASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 AL645728.2-201ENST00000641974 660 ntBASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.37■□□□□ 0.53
FNDC1Q4ZHG4 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 FAM58DP-201ENST00000428076 619 ntBASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 AC015911.4-201ENST00000588022 1070 ntBASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
FNDC1Q4ZHG4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 AC002056.1-201ENST00000395613 760 ntBASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 AC051619.7-201ENST00000568314 623 ntBASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 AL133373.2-201ENST00000623187 2828 ntBASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 AC243562.1-201ENST00000560672 389 ntBASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.35■□□□□ 0.53
FNDC1Q4ZHG4 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 AL592309.1-201ENST00000443127 649 ntBASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 AL390955.2-201ENST00000603032 514 ntBASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
FNDC1Q4ZHG4 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms