Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 PAWRP1-201ENST00000451083 565 ntBASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 OR7E47P-204ENST00000575924 449 ntBASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTC1Q2NKJ3 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AL049757.1-201ENST00000616842 1596 ntBASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AC134043.2-201ENST00000624206 2238 ntBASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AC004461.1-201ENST00000412461 403 ntBASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AC005498.2-205ENST00000593218 784 ntBASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AC105339.1-204ENST00000636249 355 ntBASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 AC092902.6-201ENST00000641783 218 ntBASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CTC1Q2NKJ3 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CTC1Q2NKJ3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.52■□□□□ 0.55
CTC1Q2NKJ3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
CTC1Q2NKJ3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC18.52■□□□□ 0.55
CTC1Q2NKJ3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.52■□□□□ 0.55
CTC1Q2NKJ3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CTC1Q2NKJ3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 AC091812.2-201ENST00000619081 385 ntBASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CTC1Q2NKJ3 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 AC025580.3-201ENST00000617932 1424 ntBASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CTC1Q2NKJ3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms