Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH1Q08174 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH1Q08174 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDH1Q08174 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PCDH1Q08174 ABCD1P5-201ENST00000445663 754 ntBASIC16.75■□□□□ 0.27
PCDH1Q08174 AP000867.3-201ENST00000524675 377 ntBASIC16.75■□□□□ 0.27
PCDH1Q08174 AC124947.2-201ENST00000547118 1133 ntBASIC16.75■□□□□ 0.27
PCDH1Q08174 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH1Q08174 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH1Q08174 AC092119.3-201ENST00000612618 583 ntBASIC16.75■□□□□ 0.27
PCDH1Q08174 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.75■□□□□ 0.27
PCDH1Q08174 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.75■□□□□ 0.27
PCDH1Q08174 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PCDH1Q08174 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH1Q08174 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH1Q08174 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PCDH1Q08174 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDH1Q08174 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDH1Q08174 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDH1Q08174 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 AC099398.1-201ENST00000567919 2776 ntBASIC16.74■□□□□ 0.27
PCDH1Q08174 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH1Q08174 KLF4P1-201ENST00000412782 1185 ntBASIC16.74■□□□□ 0.27
PCDH1Q08174 SPDYE21P-201ENST00000413323 827 ntBASIC16.74■□□□□ 0.27
PCDH1Q08174 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 NUS1P1-201ENST00000446295 882 ntBASIC16.74■□□□□ 0.27
PCDH1Q08174 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH1Q08174 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.74■□□□□ 0.27
PCDH1Q08174 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDH1Q08174 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.74■□□□□ 0.27
PCDH1Q08174 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.74■□□□□ 0.27
PCDH1Q08174 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PCDH1Q08174 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.74■□□□□ 0.27
PCDH1Q08174 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH1Q08174 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
PCDH1Q08174 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDH1Q08174 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PCDH1Q08174 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH1Q08174 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PCDH1Q08174 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH1Q08174 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.73■□□□□ 0.27
PCDH1Q08174 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH1Q08174 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH1Q08174 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.73■□□□□ 0.27
PCDH1Q08174 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.73■□□□□ 0.27
PCDH1Q08174 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.73■□□□□ 0.27
PCDH1Q08174 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.73■□□□□ 0.27
PCDH1Q08174 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PCDH1Q08174 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms