Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MIR4469-201ENST00000583919 79 ntBASIC20.25■□□□□ 0.83
GABPAQ06546 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.25■□□□□ 0.83
GABPAQ06546 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.25■□□□□ 0.83
GABPAQ06546 AC023141.13-201ENST00000604991 943 ntBASIC20.25■□□□□ 0.83
GABPAQ06546 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC20.25■□□□□ 0.83
GABPAQ06546 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.25■□□□□ 0.83
GABPAQ06546 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.25■□□□□ 0.83
GABPAQ06546 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABPAQ06546 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.25■□□□□ 0.83
GABPAQ06546 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABPAQ06546 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABPAQ06546 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
GABPAQ06546 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC20.25■□□□□ 0.83
GABPAQ06546 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
GABPAQ06546 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
GABPAQ06546 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.24■□□□□ 0.83
GABPAQ06546 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 AC211486.1-202ENST00000416371 468 ntBASIC20.24■□□□□ 0.83
GABPAQ06546 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC20.24■□□□□ 0.83
GABPAQ06546 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 DNAJB3-202ENST00000449667 1266 ntBASIC20.24■□□□□ 0.83
GABPAQ06546 AC211476.1-201ENST00000503899 468 ntBASIC20.24■□□□□ 0.83
GABPAQ06546 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.24■□□□□ 0.83
GABPAQ06546 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
GABPAQ06546 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.24■□□□□ 0.83
GABPAQ06546 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.24■□□□□ 0.83
GABPAQ06546 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GABPAQ06546 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
GABPAQ06546 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
GABPAQ06546 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC20.24■□□□□ 0.83
GABPAQ06546 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GABPAQ06546 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
GABPAQ06546 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.23■□□□□ 0.83
GABPAQ06546 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.23■□□□□ 0.83
GABPAQ06546 AC074386.1-202ENST00000463561 864 ntBASIC20.23■□□□□ 0.83
GABPAQ06546 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
GABPAQ06546 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
GABPAQ06546 AL078644.1-201ENST00000609881 752 ntBASIC20.23■□□□□ 0.83
GABPAQ06546 AC007064.4-201ENST00000637740 555 ntBASIC20.23■□□□□ 0.83
GABPAQ06546 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.23■□□□□ 0.83
GABPAQ06546 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 AC129492.6-201ENST00000611383 1305 ntBASIC20.23■□□□□ 0.83
GABPAQ06546 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.23■□□□□ 0.83
GABPAQ06546 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.23■□□□□ 0.83
GABPAQ06546 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
GABPAQ06546 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
GABPAQ06546 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 AC134043.2-201ENST00000624206 2238 ntBASIC20.22■□□□□ 0.83
GABPAQ06546 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
GABPAQ06546 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 ELL2P1-201ENST00000413990 1906 ntBASIC20.22■□□□□ 0.83
GABPAQ06546 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.22■□□□□ 0.83
GABPAQ06546 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.22■□□□□ 0.83
GABPAQ06546 RPS8P6-201ENST00000426177 609 ntBASIC20.22■□□□□ 0.83
GABPAQ06546 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20.22■□□□□ 0.83
GABPAQ06546 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.22■□□□□ 0.83
GABPAQ06546 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.22■□□□□ 0.83
GABPAQ06546 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.22■□□□□ 0.83
GABPAQ06546 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.22■□□□□ 0.83
GABPAQ06546 REXO1L3P-201ENST00000622202 1288 ntBASIC20.22■□□□□ 0.83
GABPAQ06546 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
GABPAQ06546 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.22■□□□□ 0.83
GABPAQ06546 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.22■□□□□ 0.83
GABPAQ06546 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
GABPAQ06546 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
GABPAQ06546 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.21■□□□□ 0.83
GABPAQ06546 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms