Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 AC105339.3-201ENST00000560043 636 ntBASIC19.85■□□□□ 0.77
CHMP4BP1P59074 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 Z83851.2-201ENST00000609564 659 ntBASIC19.85■□□□□ 0.77
CHMP4BP1P59074 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 AC008735.5-201ENST00000623544 497 ntBASIC19.85■□□□□ 0.77
CHMP4BP1P59074 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 AC138028.4-201ENST00000564984 1845 ntBASIC19.85■□□□□ 0.77
CHMP4BP1P59074 AL645608.8-201ENST00000606034 2086 ntBASIC19.85■□□□□ 0.77
CHMP4BP1P59074 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHMP4BP1P59074 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 AC010460.3-201ENST00000511359 1579 ntBASIC19.84■□□□□ 0.77
CHMP4BP1P59074 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 AC034105.1-201ENST00000563488 319 ntBASIC19.84■□□□□ 0.77
CHMP4BP1P59074 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 AC010327.4-202ENST00000591484 748 ntBASIC19.84■□□□□ 0.77
CHMP4BP1P59074 AL691403.2-201ENST00000618460 490 ntBASIC19.84■□□□□ 0.77
CHMP4BP1P59074 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 PHGDH-209ENST00000641074 1780 ntBASIC19.84■□□□□ 0.77
CHMP4BP1P59074 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 AC080080.1-201ENST00000625121 2420 ntBASIC19.84■□□□□ 0.77
CHMP4BP1P59074 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.84■□□□□ 0.77
CHMP4BP1P59074 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 AC124067.4-201ENST00000519691 2379 ntBASIC19.83■□□□□ 0.77
CHMP4BP1P59074 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 CD63-204ENST00000546939 779 ntTSL 3 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 AC145285.3-201ENST00000564603 959 ntBASIC19.83■□□□□ 0.77
CHMP4BP1P59074 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHMP4BP1P59074 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
CHMP4BP1P59074 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms