Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.64■□□□□ 0.25
VSX2P58304 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.64■□□□□ 0.25
VSX2P58304 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
VSX2P58304 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
VSX2P58304 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
VSX2P58304 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.63■□□□□ 0.25
VSX2P58304 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.63■□□□□ 0.25
VSX2P58304 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.63■□□□□ 0.25
VSX2P58304 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.63■□□□□ 0.25
VSX2P58304 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
VSX2P58304 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.63■□□□□ 0.25
VSX2P58304 MIR7706-201ENST00000613747 67 ntBASIC16.63■□□□□ 0.25
VSX2P58304 AC107918.4-202ENST00000641623 219 ntBASIC16.63■□□□□ 0.25
VSX2P58304 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.63■□□□□ 0.25
VSX2P58304 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 AC046185.3-201ENST00000623228 1824 ntBASIC16.63■□□□□ 0.25
VSX2P58304 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
VSX2P58304 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
VSX2P58304 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.62■□□□□ 0.25
VSX2P58304 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.62■□□□□ 0.25
VSX2P58304 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 LYSMD4-203ENST00000378904 2122 ntBASIC16.62■□□□□ 0.25
VSX2P58304 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.62■□□□□ 0.25
VSX2P58304 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.62■□□□□ 0.25
VSX2P58304 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.62■□□□□ 0.25
VSX2P58304 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.62■□□□□ 0.25
VSX2P58304 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.62■□□□□ 0.25
VSX2P58304 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.62■□□□□ 0.25
VSX2P58304 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.62■□□□□ 0.25
VSX2P58304 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.62■□□□□ 0.25
VSX2P58304 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
VSX2P58304 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
VSX2P58304 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
VSX2P58304 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.61■□□□□ 0.25
VSX2P58304 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.61■□□□□ 0.25
VSX2P58304 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.61■□□□□ 0.25
VSX2P58304 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
VSX2P58304 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
VSX2P58304 AC097637.2-201ENST00000624096 1997 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms