Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 AC108860.2-201ENST00000562760 2183 ntBASIC18.5■□□□□ 0.55
CDH8P55286 LETM1P2-201ENST00000597330 2178 ntBASIC18.5■□□□□ 0.55
CDH8P55286 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CDH8P55286 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH8P55286 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH8P55286 SLC25A1P3-201ENST00000395415 828 ntBASIC18.5■□□□□ 0.55
CDH8P55286 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH8P55286 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.5■□□□□ 0.55
CDH8P55286 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH8P55286 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.5■□□□□ 0.55
CDH8P55286 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.5■□□□□ 0.55
CDH8P55286 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CDH8P55286 AC004706.3-202ENST00000621574 984 ntBASIC18.5■□□□□ 0.55
CDH8P55286 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CDH8P55286 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CDH8P55286 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 AP002414.3-201ENST00000589352 1468 ntBASIC18.5■□□□□ 0.55
CDH8P55286 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 AC006504.4-201ENST00000592118 1568 ntBASIC18.5■□□□□ 0.55
CDH8P55286 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH8P55286 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDH8P55286 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.5■□□□□ 0.55
CDH8P55286 AC016396.2-201ENST00000562575 1417 ntBASIC18.49■□□□□ 0.55
CDH8P55286 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
CDH8P55286 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH8P55286 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH8P55286 LAGE3P1-201ENST00000425356 484 ntBASIC18.49■□□□□ 0.55
CDH8P55286 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.49■□□□□ 0.55
CDH8P55286 AC008735.5-201ENST00000623544 497 ntBASIC18.49■□□□□ 0.55
CDH8P55286 AC116407.3-201ENST00000623905 1129 ntBASIC18.49■□□□□ 0.55
CDH8P55286 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.49■□□□□ 0.55
CDH8P55286 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 AC243591.1-201ENST00000452967 1364 ntBASIC18.49■□□□□ 0.55
CDH8P55286 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDH8P55286 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDH8P55286 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH8P55286 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH8P55286 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CDH8P55286 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH8P55286 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH8P55286 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH8P55286 ACTG1P4-201ENST00000425123 1122 ntBASIC18.48■□□□□ 0.55
CDH8P55286 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.48■□□□□ 0.55
CDH8P55286 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH8P55286 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH8P55286 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH8P55286 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.48■□□□□ 0.55
CDH8P55286 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CDH8P55286 AL353135.1-201ENST00000606729 504 ntBASIC18.48■□□□□ 0.55
CDH8P55286 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.48■□□□□ 0.55
CDH8P55286 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH8P55286 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CDH8P55286 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH8P55286 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDH8P55286 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CDH8P55286 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CDH8P55286 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH8P55286 AC012313.1-201ENST00000593393 3059 ntBASIC18.48■□□□□ 0.55
CDH8P55286 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH8P55286 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms