Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
RAD23BP54727 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAD23BP54727 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.56■□□□□ 0.56
RAD23BP54727 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
RAD23BP54727 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
RAD23BP54727 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.55■□□□□ 0.56
RAD23BP54727 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.55■□□□□ 0.56
RAD23BP54727 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 AL356309.3-201ENST00000624132 1934 ntBASIC18.55■□□□□ 0.56
RAD23BP54727 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.55■□□□□ 0.56
RAD23BP54727 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
RAD23BP54727 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 BX005266.1-201ENST00000473402 457 ntBASIC18.55■□□□□ 0.56
RAD23BP54727 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.55■□□□□ 0.56
RAD23BP54727 SART3-203ENST00000546611 1184 ntBASIC18.55■□□□□ 0.56
RAD23BP54727 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
RAD23BP54727 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.55■□□□□ 0.56
RAD23BP54727 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.55■□□□□ 0.56
RAD23BP54727 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
RAD23BP54727 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RAD23BP54727 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RAD23BP54727 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD23BP54727 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
RAD23BP54727 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 AL135999.2-201ENST00000622438 1686 ntBASIC18.54■□□□□ 0.56
RAD23BP54727 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAD23BP54727 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RAD23BP54727 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD23BP54727 AC079781.3-201ENST00000449110 356 ntBASIC18.54■□□□□ 0.56
RAD23BP54727 SIGLEC30P-201ENST00000455569 941 ntBASIC18.54■□□□□ 0.56
RAD23BP54727 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.54■□□□□ 0.56
RAD23BP54727 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.54■□□□□ 0.56
RAD23BP54727 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD23BP54727 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.54■□□□□ 0.56
RAD23BP54727 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.54■□□□□ 0.56
RAD23BP54727 AL139288.1-201ENST00000623748 933 ntBASIC18.54■□□□□ 0.56
RAD23BP54727 AL645608.8-201ENST00000606034 2086 ntBASIC18.54■□□□□ 0.56
RAD23BP54727 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
RAD23BP54727 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD23BP54727 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.54■□□□□ 0.56
RAD23BP54727 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.54■□□□□ 0.56
RAD23BP54727 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RAD23BP54727 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.53■□□□□ 0.56
RAD23BP54727 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.53■□□□□ 0.56
RAD23BP54727 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.53■□□□□ 0.56
RAD23BP54727 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.53■□□□□ 0.56
RAD23BP54727 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAD23BP54727 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RAD23BP54727 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 PRYP5-201ENST00000451909 266 ntBASIC18.53■□□□□ 0.56
RAD23BP54727 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD23BP54727 AC016396.2-201ENST00000562575 1417 ntBASIC18.53■□□□□ 0.56
RAD23BP54727 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD23BP54727 AL121912.1-201ENST00000603683 238 ntBASIC18.53■□□□□ 0.56
RAD23BP54727 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD23BP54727 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.53■□□□□ 0.56
RAD23BP54727 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.53■□□□□ 0.56
RAD23BP54727 OR6D1P-202ENST00000641007 5290 ntBASIC18.53■□□□□ 0.56
RAD23BP54727 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
RAD23BP54727 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RAD23BP54727 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RAD23BP54727 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RAD23BP54727 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RAD23BP54727 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RAD23BP54727 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms