Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.51■□□□□ 0.39
LIMK2P53671 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
LIMK2P53671 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
LIMK2P53671 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.51■□□□□ 0.39
LIMK2P53671 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.51■□□□□ 0.39
LIMK2P53671 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.51■□□□□ 0.39
LIMK2P53671 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LIMK2P53671 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.51■□□□□ 0.39
LIMK2P53671 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
LIMK2P53671 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
LIMK2P53671 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LIMK2P53671 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 COX5BP2-201ENST00000392354 334 ntBASIC17.5■□□□□ 0.39
LIMK2P53671 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC17.5■□□□□ 0.39
LIMK2P53671 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK2P53671 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.5■□□□□ 0.39
LIMK2P53671 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK2P53671 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.5■□□□□ 0.39
LIMK2P53671 TK1-204ENST00000590430 683 ntTSL 3 BASIC17.5■□□□□ 0.39
LIMK2P53671 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.5■□□□□ 0.39
LIMK2P53671 AL121912.1-201ENST00000603683 238 ntBASIC17.5■□□□□ 0.39
LIMK2P53671 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LIMK2P53671 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.5■□□□□ 0.39
LIMK2P53671 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.5■□□□□ 0.39
LIMK2P53671 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.5■□□□□ 0.39
LIMK2P53671 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.5■□□□□ 0.39
LIMK2P53671 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LIMK2P53671 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LIMK2P53671 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
LIMK2P53671 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 POM121L3P-201ENST00000419331 1163 ntBASIC17.49■□□□□ 0.39
LIMK2P53671 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.49■□□□□ 0.39
LIMK2P53671 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
LIMK2P53671 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LIMK2P53671 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.49■□□□□ 0.39
LIMK2P53671 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.49■□□□□ 0.39
LIMK2P53671 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.49■□□□□ 0.39
LIMK2P53671 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LIMK2P53671 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LIMK2P53671 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms