Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.35■□□□□ 0.69
LBX1P52954 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LBX1P52954 AC093010.1-201ENST00000473625 1624 ntBASIC19.35■□□□□ 0.69
LBX1P52954 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LBX1P52954 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.35■□□□□ 0.69
LBX1P52954 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
LBX1P52954 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.34■□□□□ 0.69
LBX1P52954 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.34■□□□□ 0.69
LBX1P52954 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC19.34■□□□□ 0.69
LBX1P52954 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.34■□□□□ 0.69
LBX1P52954 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
LBX1P52954 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LBX1P52954 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC19.34■□□□□ 0.69
LBX1P52954 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC19.34■□□□□ 0.69
LBX1P52954 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.34■□□□□ 0.69
LBX1P52954 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC19.34■□□□□ 0.69
LBX1P52954 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC19.34■□□□□ 0.69
LBX1P52954 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC19.34■□□□□ 0.69
LBX1P52954 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC19.34■□□□□ 0.69
LBX1P52954 ZNF767P-206ENST00000513792 565 ntBASIC19.34■□□□□ 0.69
LBX1P52954 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.34■□□□□ 0.69
LBX1P52954 MBP-227ENST00000526111 581 ntTSL 4 BASIC19.34■□□□□ 0.69
LBX1P52954 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC19.34■□□□□ 0.69
LBX1P52954 AC015936.2-201ENST00000593177 259 ntBASIC19.34■□□□□ 0.69
LBX1P52954 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.34■□□□□ 0.69
LBX1P52954 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
LBX1P52954 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.34■□□□□ 0.69
LBX1P52954 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.34■□□□□ 0.69
LBX1P52954 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.34■□□□□ 0.69
LBX1P52954 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LBX1P52954 AC016027.1-202ENST00000607927 1699 ntBASIC19.33■□□□□ 0.69
LBX1P52954 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.33■□□□□ 0.69
LBX1P52954 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LBX1P52954 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC19.33■□□□□ 0.69
LBX1P52954 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19.33■□□□□ 0.69
LBX1P52954 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LBX1P52954 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 AC099336.1-201ENST00000417053 1171 ntBASIC19.33■□□□□ 0.68
LBX1P52954 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.33■□□□□ 0.68
LBX1P52954 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.33■□□□□ 0.68
LBX1P52954 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC19.33■□□□□ 0.68
LBX1P52954 IGHJ2P-201ENST00000454480 60 ntBASIC19.33■□□□□ 0.68
LBX1P52954 AC002558.1-201ENST00000488906 803 ntBASIC19.33■□□□□ 0.68
LBX1P52954 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.33■□□□□ 0.68
LBX1P52954 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC19.33■□□□□ 0.68
LBX1P52954 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.33■□□□□ 0.68
LBX1P52954 AC123567.1-201ENST00000548294 1261 ntBASIC19.33■□□□□ 0.68
LBX1P52954 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.33■□□□□ 0.68
LBX1P52954 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
LBX1P52954 BTNL10-201ENST00000595971 695 ntBASIC19.33■□□□□ 0.68
LBX1P52954 AC016629.1-201ENST00000596579 586 ntBASIC19.33■□□□□ 0.68
LBX1P52954 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.33■□□□□ 0.68
LBX1P52954 RN7SL828P-201ENST00000607615 303 ntBASIC19.33■□□□□ 0.68
LBX1P52954 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.33■□□□□ 0.68
LBX1P52954 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC19.33■□□□□ 0.68
LBX1P52954 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
LBX1P52954 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.33■□□□□ 0.68
LBX1P52954 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC19.32■□□□□ 0.68
LBX1P52954 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 KLF2P4-201ENST00000451959 1225 ntBASIC19.32■□□□□ 0.68
LBX1P52954 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.32■□□□□ 0.68
LBX1P52954 RNA5SP412-201ENST00000516234 123 ntBASIC19.32■□□□□ 0.68
LBX1P52954 ZNF890P-202ENST00000530367 1156 ntBASIC19.32■□□□□ 0.68
LBX1P52954 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.32■□□□□ 0.68
LBX1P52954 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.32■□□□□ 0.68
LBX1P52954 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC19.32■□□□□ 0.68
LBX1P52954 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.32■□□□□ 0.68
LBX1P52954 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LBX1P52954 PDIA3P1-201ENST00000471856 1510 ntBASIC19.31■□□□□ 0.68
LBX1P52954 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.31■□□□□ 0.68
LBX1P52954 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.31■□□□□ 0.68
LBX1P52954 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
LBX1P52954 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LBX1P52954 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms