Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.92■□□□□ 0.62
CASP4P49662 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.92■□□□□ 0.62
CASP4P49662 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.92■□□□□ 0.62
CASP4P49662 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CASP4P49662 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CASP4P49662 LINC02012-201ENST00000608206 1725 ntBASIC18.91■□□□□ 0.62
CASP4P49662 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CASP4P49662 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CASP4P49662 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
CASP4P49662 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP4P49662 AF238378.1-201ENST00000526806 358 ntBASIC18.91■□□□□ 0.62
CASP4P49662 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.91■□□□□ 0.62
CASP4P49662 MTDHP3-201ENST00000594186 672 ntBASIC18.91■□□□□ 0.62
CASP4P49662 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.91■□□□□ 0.62
CASP4P49662 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 REXO1L6P-202ENST00000619970 1078 ntBASIC18.91■□□□□ 0.62
CASP4P49662 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.91■□□□□ 0.62
CASP4P49662 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
CASP4P49662 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CASP4P49662 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.91■□□□□ 0.62
CASP4P49662 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.91■□□□□ 0.62
CASP4P49662 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CASP4P49662 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.91■□□□□ 0.62
CASP4P49662 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CASP4P49662 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CASP4P49662 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
CASP4P49662 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.9■□□□□ 0.62
CASP4P49662 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 SIGLEC30P-201ENST00000455569 941 ntBASIC18.9■□□□□ 0.62
CASP4P49662 EMBP1-201ENST00000458200 901 ntBASIC18.9■□□□□ 0.62
CASP4P49662 BX005266.1-201ENST00000473402 457 ntBASIC18.9■□□□□ 0.62
CASP4P49662 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP4P49662 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.9■□□□□ 0.62
CASP4P49662 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CASP4P49662 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.9■□□□□ 0.62
CASP4P49662 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CASP4P49662 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.9■□□□□ 0.62
CASP4P49662 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CASP4P49662 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.89■□□□□ 0.62
CASP4P49662 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CASP4P49662 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.89■□□□□ 0.62
CASP4P49662 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 AC009053.2-201ENST00000563701 2365 ntBASIC18.89■□□□□ 0.61
CASP4P49662 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
CASP4P49662 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CASP4P49662 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CASP4P49662 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.89■□□□□ 0.61
CASP4P49662 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms