Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC19.56■□□□□ 0.72
TM4SF4P48230 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF4P48230 AL031055.1-201ENST00000606362 631 ntBASIC19.56■□□□□ 0.72
TM4SF4P48230 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.56■□□□□ 0.72
TM4SF4P48230 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM4SF4P48230 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.56■□□□□ 0.72
TM4SF4P48230 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TM4SF4P48230 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TM4SF4P48230 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF4P48230 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF4P48230 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF4P48230 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF4P48230 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF4P48230 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF4P48230 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.55■□□□□ 0.72
TM4SF4P48230 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF4P48230 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.55■□□□□ 0.72
TM4SF4P48230 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC19.55■□□□□ 0.72
TM4SF4P48230 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF4P48230 POLE2-203ENST00000553805 496 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF4P48230 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.55■□□□□ 0.72
TM4SF4P48230 AL139327.4-201ENST00000612362 153 ntBASIC19.55■□□□□ 0.72
TM4SF4P48230 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF4P48230 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC19.55■□□□□ 0.72
TM4SF4P48230 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TM4SF4P48230 AC116562.4-201ENST00000641316 2276 ntBASIC19.55■□□□□ 0.72
TM4SF4P48230 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.55■□□□□ 0.72
TM4SF4P48230 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM4SF4P48230 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TM4SF4P48230 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF4P48230 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF4P48230 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF4P48230 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF4P48230 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF4P48230 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TM4SF4P48230 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
TM4SF4P48230 AC112492.5-201ENST00000421897 457 ntBASIC19.54■□□□□ 0.72
TM4SF4P48230 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF4P48230 AC132938.2-201ENST00000579188 680 ntBASIC19.54■□□□□ 0.72
TM4SF4P48230 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.54■□□□□ 0.72
TM4SF4P48230 AL591163.1-201ENST00000641757 987 ntBASIC19.54■□□□□ 0.72
TM4SF4P48230 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF4P48230 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM4SF4P48230 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.54■□□□□ 0.72
TM4SF4P48230 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF4P48230 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF4P48230 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.53■□□□□ 0.72
TM4SF4P48230 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF4P48230 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF4P48230 AC016027.1-202ENST00000607927 1699 ntBASIC19.53■□□□□ 0.72
TM4SF4P48230 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.53■□□□□ 0.72
TM4SF4P48230 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.53■□□□□ 0.72
TM4SF4P48230 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 AP006294.1-201ENST00000415407 339 ntBASIC19.53■□□□□ 0.72
TM4SF4P48230 RN7SL752P-201ENST00000463779 287 ntBASIC19.53■□□□□ 0.72
TM4SF4P48230 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC19.53■□□□□ 0.72
TM4SF4P48230 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.53■□□□□ 0.72
TM4SF4P48230 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.53■□□□□ 0.72
TM4SF4P48230 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TM4SF4P48230 AL844908.2-201ENST00000609461 460 ntBASIC19.53■□□□□ 0.72
TM4SF4P48230 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC19.53■□□□□ 0.72
TM4SF4P48230 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
TM4SF4P48230 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.53■□□□□ 0.72
TM4SF4P48230 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM4SF4P48230 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.52■□□□□ 0.72
TM4SF4P48230 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.52■□□□□ 0.72
TM4SF4P48230 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.52■□□□□ 0.72
TM4SF4P48230 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM4SF4P48230 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms