Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NKX2-1P43699 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NKX2-1P43699 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-1P43699 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-1P43699 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-1P43699 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-1P43699 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-1P43699 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NKX2-1P43699 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 KRT18P65-201ENST00000439811 1286 ntBASIC14.25□□□□□ -0.13
NKX2-1P43699 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-1P43699 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-1P43699 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-1P43699 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
NKX2-1P43699 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NKX2-1P43699 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC14.25□□□□□ -0.13
NKX2-1P43699 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC14.25□□□□□ -0.13
NKX2-1P43699 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NKX2-1P43699 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.24□□□□□ -0.13
NKX2-1P43699 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
NKX2-1P43699 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 AC113404.2-201ENST00000507884 177 ntBASIC14.24□□□□□ -0.13
NKX2-1P43699 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.24□□□□□ -0.13
NKX2-1P43699 AP005242.2-201ENST00000580065 1175 ntBASIC14.24□□□□□ -0.13
NKX2-1P43699 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
NKX2-1P43699 AP001412.1-201ENST00000608405 714 ntBASIC14.24□□□□□ -0.13
NKX2-1P43699 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.24□□□□□ -0.13
NKX2-1P43699 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NKX2-1P43699 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.24□□□□□ -0.13
NKX2-1P43699 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-1P43699 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-1P43699 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-1P43699 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-1P43699 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-1P43699 RNF216P1-203ENST00000404404 2427 ntBASIC14.23□□□□□ -0.13
NKX2-1P43699 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
NKX2-1P43699 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-1P43699 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-1P43699 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-1P43699 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-1P43699 GCSHP5-201ENST00000443090 522 ntBASIC14.23□□□□□ -0.13
NKX2-1P43699 CCR12P-201ENST00000446203 998 ntBASIC14.23□□□□□ -0.13
NKX2-1P43699 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.23□□□□□ -0.13
NKX2-1P43699 BX088651.1-201ENST00000540551 451 ntBASIC14.23□□□□□ -0.13
NKX2-1P43699 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-1P43699 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-1P43699 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-1P43699 AL139327.4-201ENST00000612362 153 ntBASIC14.23□□□□□ -0.13
NKX2-1P43699 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.23□□□□□ -0.13
NKX2-1P43699 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-1P43699 CYP2T1P-202ENST00000641596 2535 ntBASIC14.23□□□□□ -0.13
NKX2-1P43699 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.23□□□□□ -0.13
NKX2-1P43699 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NKX2-1P43699 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms