Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RORAP35398 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.51■□□□□ 0.23
RORAP35398 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.5■□□□□ 0.23
RORAP35398 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RORAP35398 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 MYCLP1-201ENST00000372451 1075 ntBASIC16.5■□□□□ 0.23
RORAP35398 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.5■□□□□ 0.23
RORAP35398 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.5■□□□□ 0.23
RORAP35398 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.5■□□□□ 0.23
RORAP35398 AC108751.1-201ENST00000490852 363 ntBASIC16.5■□□□□ 0.23
RORAP35398 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 AL139424.1-201ENST00000607572 797 ntBASIC16.5■□□□□ 0.23
RORAP35398 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.5■□□□□ 0.23
RORAP35398 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.5■□□□□ 0.23
RORAP35398 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.5■□□□□ 0.23
RORAP35398 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RORAP35398 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.5■□□□□ 0.23
RORAP35398 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RORAP35398 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 AC018470.1-201ENST00000624790 3129 ntBASIC16.49■□□□□ 0.23
RORAP35398 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RORAP35398 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RORAP35398 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.49■□□□□ 0.23
RORAP35398 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
RORAP35398 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.49■□□□□ 0.23
RORAP35398 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
RORAP35398 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.49■□□□□ 0.23
RORAP35398 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RORAP35398 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RORAP35398 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RORAP35398 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.48■□□□□ 0.23
RORAP35398 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.48■□□□□ 0.23
RORAP35398 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
RORAP35398 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.48■□□□□ 0.23
RORAP35398 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.48■□□□□ 0.23
RORAP35398 AC007967.2-201ENST00000432613 625 ntBASIC16.48■□□□□ 0.23
RORAP35398 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.48■□□□□ 0.23
RORAP35398 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RORAP35398 RNA5SP416-201ENST00000516838 111 ntBASIC16.48■□□□□ 0.23
RORAP35398 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.48■□□□□ 0.23
RORAP35398 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.48■□□□□ 0.23
RORAP35398 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms