Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTNNA1P35221 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CTNNA1P35221 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNNA1P35221 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNNA1P35221 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNNA1P35221 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.36■□□□□ 0.53
CTNNA1P35221 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.36■□□□□ 0.53
CTNNA1P35221 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNNA1P35221 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.36■□□□□ 0.53
CTNNA1P35221 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.36■□□□□ 0.53
CTNNA1P35221 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.36■□□□□ 0.53
CTNNA1P35221 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNNA1P35221 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNNA1P35221 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.36■□□□□ 0.53
CTNNA1P35221 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CTNNA1P35221 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CTNNA1P35221 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 AC046185.3-201ENST00000623228 1824 ntBASIC18.35■□□□□ 0.53
CTNNA1P35221 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTNNA1P35221 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.35■□□□□ 0.53
CTNNA1P35221 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.35■□□□□ 0.53
CTNNA1P35221 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.35■□□□□ 0.53
CTNNA1P35221 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTNNA1P35221 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.35■□□□□ 0.53
CTNNA1P35221 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 AK4P3-201ENST00000418260 669 ntBASIC18.35■□□□□ 0.53
CTNNA1P35221 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
CTNNA1P35221 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTNNA1P35221 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CTNNA1P35221 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CTNNA1P35221 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CTNNA1P35221 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CTNNA1P35221 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.34■□□□□ 0.53
CTNNA1P35221 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.34■□□□□ 0.53
CTNNA1P35221 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNNA1P35221 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTNNA1P35221 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTNNA1P35221 CICP6-201ENST00000457191 2729 ntBASIC18.34■□□□□ 0.53
CTNNA1P35221 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTNNA1P35221 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.34■□□□□ 0.53
CTNNA1P35221 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CTNNA1P35221 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.34■□□□□ 0.53
CTNNA1P35221 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.34■□□□□ 0.53
CTNNA1P35221 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.34■□□□□ 0.53
CTNNA1P35221 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.34■□□□□ 0.53
CTNNA1P35221 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 AC019129.2-201ENST00000609837 1235 ntBASIC18.34■□□□□ 0.53
CTNNA1P35221 AC083849.1-201ENST00000615227 514 ntBASIC18.34■□□□□ 0.53
CTNNA1P35221 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.34■□□□□ 0.53
CTNNA1P35221 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CTNNA1P35221 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.34■□□□□ 0.53
CTNNA1P35221 LINC02012-201ENST00000608206 1725 ntBASIC18.34■□□□□ 0.53
CTNNA1P35221 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CTNNA1P35221 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CTNNA1P35221 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CTNNA1P35221 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms