Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
CHRNA5P30532 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.11■□□□□ 0.97
CHRNA5P30532 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA5P30532 AC012569.1-201ENST00000591191 1524 ntBASIC21.11■□□□□ 0.97
CHRNA5P30532 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA5P30532 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHRNA5P30532 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA5P30532 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNA5P30532 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNA5P30532 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNA5P30532 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNA5P30532 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CHRNA5P30532 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA5P30532 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC21.11■□□□□ 0.97
CHRNA5P30532 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.11■□□□□ 0.97
CHRNA5P30532 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
CHRNA5P30532 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC21.11■□□□□ 0.97
CHRNA5P30532 AC027307.2-201ENST00000591252 911 ntBASIC21.11■□□□□ 0.97
CHRNA5P30532 REXO1L11P-201ENST00000620964 1927 ntBASIC21.11■□□□□ 0.97
CHRNA5P30532 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA5P30532 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRNA5P30532 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA5P30532 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CHRNA5P30532 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRNA5P30532 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CHRNA5P30532 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.11■□□□□ 0.97
CHRNA5P30532 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.1■□□□□ 0.97
CHRNA5P30532 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.1■□□□□ 0.97
CHRNA5P30532 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.1■□□□□ 0.97
CHRNA5P30532 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 MIR346-201ENST00000362234 95 ntBASIC21.1■□□□□ 0.97
CHRNA5P30532 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC21.1■□□□□ 0.97
CHRNA5P30532 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC21.1■□□□□ 0.97
CHRNA5P30532 SPTLC1P1-201ENST00000447199 261 ntBASIC21.1■□□□□ 0.97
CHRNA5P30532 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.1■□□□□ 0.97
CHRNA5P30532 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC21.1■□□□□ 0.97
CHRNA5P30532 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.1■□□□□ 0.97
CHRNA5P30532 AC073592.8-201ENST00000624126 511 ntBASIC21.1■□□□□ 0.97
CHRNA5P30532 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 WASH6P-202ENST00000359512 1437 ntBASIC21.1■□□□□ 0.97
CHRNA5P30532 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CHRNA5P30532 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
CHRNA5P30532 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC21.09■□□□□ 0.97
CHRNA5P30532 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.09■□□□□ 0.97
CHRNA5P30532 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 KRT17P7-201ENST00000451704 1104 ntBASIC21.09■□□□□ 0.97
CHRNA5P30532 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.09■□□□□ 0.97
CHRNA5P30532 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.09■□□□□ 0.97
CHRNA5P30532 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 AC008267.7-201ENST00000624570 1194 ntBASIC21.09■□□□□ 0.97
CHRNA5P30532 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CHRNA5P30532 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.09■□□□□ 0.97
CHRNA5P30532 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 STK4-201ENST00000372801 2038 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CHRNA5P30532 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.09■□□□□ 0.97
CHRNA5P30532 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA5P30532 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.08■□□□□ 0.97
CHRNA5P30532 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA5P30532 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA5P30532 CALY-202ENST00000368555 783 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA5P30532 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CHRNA5P30532 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CHRNA5P30532 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
CHRNA5P30532 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA5P30532 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CHRNA5P30532 AC109635.5-201ENST00000533593 962 ntBASIC21.08■□□□□ 0.97
CHRNA5P30532 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.08■□□□□ 0.97
CHRNA5P30532 AC005412.3-201ENST00000580309 715 ntBASIC21.08■□□□□ 0.97
CHRNA5P30532 AC022144.1-201ENST00000602255 1580 ntBASIC21.08■□□□□ 0.97
CHRNA5P30532 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.08■□□□□ 0.97
CHRNA5P30532 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHRNA5P30532 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CHRNA5P30532 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
CHRNA5P30532 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms