Protein–RNA interactions for Protein: P30511

HLA-F, HLA class I histocompatibility antigen, alpha chain F, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-FP30511 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-FP30511 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-FP30511 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-FP30511 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-FP30511 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-FP30511 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-FP30511 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HLA-FP30511 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-FP30511 MCCD1P2-201ENST00000423228 335 ntBASIC17.56■□□□□ 0.4
HLA-FP30511 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HLA-FP30511 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-FP30511 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-FP30511 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-FP30511 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-FP30511 MTDHP5-201ENST00000598980 586 ntBASIC17.56■□□□□ 0.4
HLA-FP30511 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-FP30511 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-FP30511 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-FP30511 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-FP30511 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.55■□□□□ 0.4
HLA-FP30511 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-FP30511 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-FP30511 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-FP30511 MIR3687-2-201ENST00000577708 61 ntBASIC17.55■□□□□ 0.4
HLA-FP30511 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-FP30511 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-FP30511 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-FP30511 MIR3687-1-201ENST00000614492 61 ntBASIC17.55■□□□□ 0.4
HLA-FP30511 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HLA-FP30511 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-FP30511 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 AC020916.1-201ENST00000587762 1774 ntBASIC17.55■□□□□ 0.4
HLA-FP30511 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-FP30511 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-FP30511 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-FP30511 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HLA-FP30511 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-FP30511 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-FP30511 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLA-FP30511 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
HLA-FP30511 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-FP30511 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.54■□□□□ 0.4
HLA-FP30511 RHOQP3-201ENST00000437982 621 ntBASIC17.54■□□□□ 0.4
HLA-FP30511 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-FP30511 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-FP30511 AC004877.2-201ENST00000623941 599 ntBASIC17.54■□□□□ 0.4
HLA-FP30511 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-FP30511 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 GNAS-203ENST00000306120 1878 ntBASIC17.54■□□□□ 0.4
HLA-FP30511 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.54■□□□□ 0.4
HLA-FP30511 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
HLA-FP30511 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HLA-FP30511 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.53■□□□□ 0.4
HLA-FP30511 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.53■□□□□ 0.4
HLA-FP30511 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HLA-FP30511 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
HLA-FP30511 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.53■□□□□ 0.4
HLA-FP30511 AC087163.2-201ENST00000457299 853 ntBASIC17.53■□□□□ 0.4
HLA-FP30511 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms