Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
EPHA3P29320 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHA3P29320 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHA3P29320 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
EPHA3P29320 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHA3P29320 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
EPHA3P29320 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.92■□□□□ 0.3
EPHA3P29320 MTCL1P1-201ENST00000446207 792 ntBASIC16.92■□□□□ 0.3
EPHA3P29320 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.92■□□□□ 0.3
EPHA3P29320 AC002558.1-201ENST00000488906 803 ntBASIC16.92■□□□□ 0.3
EPHA3P29320 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHA3P29320 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHA3P29320 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHA3P29320 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.92■□□□□ 0.3
EPHA3P29320 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
EPHA3P29320 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.92■□□□□ 0.3
EPHA3P29320 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
EPHA3P29320 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
EPHA3P29320 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
EPHA3P29320 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHA3P29320 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHA3P29320 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
EPHA3P29320 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.91■□□□□ 0.3
EPHA3P29320 AC096633.1-201ENST00000422446 749 ntBASIC16.91■□□□□ 0.3
EPHA3P29320 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 HLA-F-220ENST00000434407 884 ntBASIC16.91■□□□□ 0.3
EPHA3P29320 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.91■□□□□ 0.3
EPHA3P29320 MIR4497-201ENST00000583208 89 ntBASIC16.91■□□□□ 0.3
EPHA3P29320 AL138966.2-201ENST00000621997 464 ntBASIC16.91■□□□□ 0.3
EPHA3P29320 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
EPHA3P29320 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHA3P29320 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.91■□□□□ 0.3
EPHA3P29320 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
EPHA3P29320 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
EPHA3P29320 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EPHA3P29320 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.91■□□□□ 0.3
EPHA3P29320 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EPHA3P29320 LINC01568-207ENST00000641790 1380 ntBASIC16.9■□□□□ 0.3
EPHA3P29320 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EPHA3P29320 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
EPHA3P29320 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms