Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
PTPN3P26045 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.71■□□□□ 0.43
PTPN3P26045 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
PTPN3P26045 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PTPN3P26045 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PTPN3P26045 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PTPN3P26045 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.71■□□□□ 0.42
PTPN3P26045 AC060834.1-201ENST00000443027 2032 ntBASIC17.71■□□□□ 0.42
PTPN3P26045 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN3P26045 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
PTPN3P26045 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTPN3P26045 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN3P26045 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPN3P26045 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
PTPN3P26045 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 SPDYE21P-201ENST00000413323 827 ntBASIC17.7■□□□□ 0.42
PTPN3P26045 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
PTPN3P26045 NUS1P1-201ENST00000446295 882 ntBASIC17.7■□□□□ 0.42
PTPN3P26045 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.7■□□□□ 0.42
PTPN3P26045 MIR3652-201ENST00000579335 131 ntBASIC17.7■□□□□ 0.42
PTPN3P26045 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN3P26045 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
PTPN3P26045 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN3P26045 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN3P26045 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.7■□□□□ 0.42
PTPN3P26045 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTPN3P26045 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
PTPN3P26045 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN3P26045 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN3P26045 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN3P26045 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN3P26045 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 AL020989.1-201ENST00000422979 469 ntBASIC17.69■□□□□ 0.42
PTPN3P26045 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN3P26045 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.69■□□□□ 0.42
PTPN3P26045 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 AD000864.1-201ENST00000624076 2295 ntBASIC17.69■□□□□ 0.42
PTPN3P26045 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTPN3P26045 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN3P26045 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN3P26045 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN3P26045 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PTPN3P26045 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
PTPN3P26045 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN3P26045 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN3P26045 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 AC132008.2-207ENST00000454517 770 ntBASIC17.68■□□□□ 0.42
PTPN3P26045 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.68■□□□□ 0.42
PTPN3P26045 AP001269.4-201ENST00000609611 512 ntBASIC17.68■□□□□ 0.42
PTPN3P26045 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN3P26045 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN3P26045 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 AC092053.1-201ENST00000605787 1936 ntBASIC17.68■□□□□ 0.42
PTPN3P26045 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN3P26045 AL121761.2-201ENST00000598007 1648 ntBASIC17.68■□□□□ 0.42
PTPN3P26045 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN3P26045 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms