Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PRPH2P23942 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPH2P23942 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.51■□□□□ 0.23
PRPH2P23942 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPH2P23942 IER3-202ENST00000376377 1350 ntBASIC16.51■□□□□ 0.23
PRPH2P23942 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PRPH2P23942 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPH2P23942 FLJ38576-201ENST00000623820 2459 ntBASIC16.51■□□□□ 0.23
PRPH2P23942 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRPH2P23942 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.5■□□□□ 0.23
PRPH2P23942 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRPH2P23942 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PRPH2P23942 RCN1P2-201ENST00000398357 915 ntBASIC16.5■□□□□ 0.23
PRPH2P23942 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PRPH2P23942 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 POM121L3P-201ENST00000419331 1163 ntBASIC16.5■□□□□ 0.23
PRPH2P23942 ACTG1P4-201ENST00000425123 1122 ntBASIC16.5■□□□□ 0.23
PRPH2P23942 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 FAM210CP-201ENST00000445714 574 ntBASIC16.5■□□□□ 0.23
PRPH2P23942 MINOS1P3-201ENST00000457048 203 ntBASIC16.5■□□□□ 0.23
PRPH2P23942 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.5■□□□□ 0.23
PRPH2P23942 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.5■□□□□ 0.23
PRPH2P23942 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PRPH2P23942 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PRPH2P23942 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
PRPH2P23942 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
PRPH2P23942 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
PRPH2P23942 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PRPH2P23942 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRPH2P23942 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 AC096582.2-201ENST00000510860 516 ntBASIC16.49■□□□□ 0.23
PRPH2P23942 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.49■□□□□ 0.23
PRPH2P23942 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 MIR3180-1-201ENST00000580374 94 ntBASIC16.49■□□□□ 0.23
PRPH2P23942 MIR3180-3-201ENST00000584616 94 ntBASIC16.49■□□□□ 0.23
PRPH2P23942 SIGLEC16-201ENST00000599858 1437 ntBASIC16.49■□□□□ 0.23
PRPH2P23942 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.49■□□□□ 0.23
PRPH2P23942 AL590326.2-201ENST00000625139 305 ntBASIC16.49■□□□□ 0.23
PRPH2P23942 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PRPH2P23942 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
PRPH2P23942 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.49■□□□□ 0.23
PRPH2P23942 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRPH2P23942 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PRPH2P23942 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.48■□□□□ 0.23
PRPH2P23942 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPH2P23942 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPH2P23942 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRPH2P23942 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
PRPH2P23942 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPH2P23942 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PRPH2P23942 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.48■□□□□ 0.23
PRPH2P23942 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRPH2P23942 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms