Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CCL4P13236 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCL4P13236 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL4P13236 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL4P13236 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCL4P13236 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCL4P13236 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL4P13236 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 FAM8A3P-201ENST00000427218 844 ntBASIC16.29■□□□□ 0.2
CCL4P13236 TIMM8BP1-201ENST00000452384 211 ntBASIC16.29■□□□□ 0.2
CCL4P13236 HLA-J-203ENST00000494367 1087 ntBASIC16.29■□□□□ 0.2
CCL4P13236 AC109322.1-201ENST00000524499 1264 ntBASIC16.29■□□□□ 0.2
CCL4P13236 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.29■□□□□ 0.2
CCL4P13236 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.29■□□□□ 0.2
CCL4P13236 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
CCL4P13236 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.29■□□□□ 0.2
CCL4P13236 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCL4P13236 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCL4P13236 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCL4P13236 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCL4P13236 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
CCL4P13236 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 AC002056.1-201ENST00000395613 760 ntBASIC16.28■□□□□ 0.2
CCL4P13236 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL4P13236 ADH5P3-201ENST00000433842 1137 ntBASIC16.28■□□□□ 0.2
CCL4P13236 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL4P13236 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL4P13236 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.28■□□□□ 0.2
CCL4P13236 AC011467.4-201ENST00000594891 528 ntBASIC16.28■□□□□ 0.2
CCL4P13236 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL4P13236 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCL4P13236 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.28■□□□□ 0.2
CCL4P13236 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCL4P13236 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.28■□□□□ 0.2
CCL4P13236 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.27■□□□□ 0.2
CCL4P13236 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCL4P13236 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
CCL4P13236 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL4P13236 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL4P13236 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.27■□□□□ 0.2
CCL4P13236 AC023141.5-201ENST00000458585 616 ntBASIC16.27■□□□□ 0.2
CCL4P13236 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL4P13236 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.27■□□□□ 0.2
CCL4P13236 AC107918.2-201ENST00000530817 355 ntBASIC16.27■□□□□ 0.2
CCL4P13236 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCL4P13236 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.27■□□□□ 0.2
CCL4P13236 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms