Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.31■□□□□ 0.52
KRT3P12035 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.31■□□□□ 0.52
KRT3P12035 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
KRT3P12035 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
KRT3P12035 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
KRT3P12035 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
KRT3P12035 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT3P12035 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRT3P12035 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.3■□□□□ 0.52
KRT3P12035 KLF4P1-201ENST00000412782 1185 ntBASIC18.3■□□□□ 0.52
KRT3P12035 KRT16P4-201ENST00000453883 522 ntBASIC18.3■□□□□ 0.52
KRT3P12035 MIR3652-201ENST00000579335 131 ntBASIC18.3■□□□□ 0.52
KRT3P12035 AL591684.3-201ENST00000605187 298 ntBASIC18.3■□□□□ 0.52
KRT3P12035 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.3■□□□□ 0.52
KRT3P12035 AP000867.4-201ENST00000641616 219 ntBASIC18.3■□□□□ 0.52
KRT3P12035 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
KRT3P12035 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
KRT3P12035 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
KRT3P12035 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
KRT3P12035 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.3■□□□□ 0.52
KRT3P12035 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
KRT3P12035 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
KRT3P12035 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT3P12035 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT3P12035 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
KRT3P12035 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
KRT3P12035 CROCCP1-201ENST00000426910 5675 ntBASIC18.29■□□□□ 0.52
KRT3P12035 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT3P12035 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT3P12035 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT3P12035 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
KRT3P12035 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 NUS1P1-201ENST00000446295 882 ntBASIC18.29■□□□□ 0.52
KRT3P12035 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT3P12035 FOSL1P1-201ENST00000511041 816 ntBASIC18.29■□□□□ 0.52
KRT3P12035 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT3P12035 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.29■□□□□ 0.52
KRT3P12035 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.29■□□□□ 0.52
KRT3P12035 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.29■□□□□ 0.52
KRT3P12035 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
KRT3P12035 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
KRT3P12035 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.29■□□□□ 0.52
KRT3P12035 AC093525.9-201ENST00000624961 1746 ntBASIC18.29■□□□□ 0.52
KRT3P12035 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
KRT3P12035 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KRT3P12035 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT3P12035 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT3P12035 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT3P12035 ABCD1P5-201ENST00000445663 754 ntBASIC18.28■□□□□ 0.52
KRT3P12035 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT3P12035 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.28■□□□□ 0.52
KRT3P12035 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT3P12035 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.28■□□□□ 0.52
KRT3P12035 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRT3P12035 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.28■□□□□ 0.52
KRT3P12035 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
KRT3P12035 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
KRT3P12035 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT3P12035 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.28■□□□□ 0.52
KRT3P12035 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
KRT3P12035 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
KRT3P12035 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
KRT3P12035 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
KRT3P12035 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.28■□□□□ 0.52
KRT3P12035 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
KRT3P12035 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
KRT3P12035 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms