Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
MS4A1P11836 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC22.31■■□□□ 1.16
MS4A1P11836 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.31■■□□□ 1.16
MS4A1P11836 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC22.31■■□□□ 1.16
MS4A1P11836 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC22.31■■□□□ 1.16
MS4A1P11836 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MS4A1P11836 AL139384.1-201ENST00000612143 3047 ntBASIC22.31■■□□□ 1.16
MS4A1P11836 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 UBALD1-205ENST00000590891 2641 ntBASIC22.3■■□□□ 1.16
MS4A1P11836 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC22.3■■□□□ 1.16
MS4A1P11836 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
MS4A1P11836 PPIH-202ENST00000372549 327 ntTSL 3 BASIC22.3■■□□□ 1.16
MS4A1P11836 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MS4A1P11836 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MS4A1P11836 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC22.3■■□□□ 1.16
MS4A1P11836 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC22.3■■□□□ 1.16
MS4A1P11836 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
MS4A1P11836 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
MS4A1P11836 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
MS4A1P11836 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC22.3■■□□□ 1.16
MS4A1P11836 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC22.3■■□□□ 1.16
MS4A1P11836 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC22.3■■□□□ 1.16
MS4A1P11836 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
MS4A1P11836 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 AL353593.2-201ENST00000602529 1483 ntBASIC22.29■■□□□ 1.16
MS4A1P11836 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 AC046158.3-201ENST00000624947 2558 ntBASIC22.29■■□□□ 1.16
MS4A1P11836 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.29■■□□□ 1.16
MS4A1P11836 TPSP2-201ENST00000561760 610 ntBASIC22.29■■□□□ 1.16
MS4A1P11836 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC22.29■■□□□ 1.16
MS4A1P11836 STK25P1-201ENST00000585406 838 ntBASIC22.29■■□□□ 1.16
MS4A1P11836 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.29■■□□□ 1.16
MS4A1P11836 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
MS4A1P11836 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC22.29■■□□□ 1.16
MS4A1P11836 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC22.29■■□□□ 1.16
MS4A1P11836 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
MS4A1P11836 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
MS4A1P11836 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC22.29■■□□□ 1.16
MS4A1P11836 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
MS4A1P11836 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
MS4A1P11836 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MS4A1P11836 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
MS4A1P11836 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
MS4A1P11836 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
MS4A1P11836 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.28■■□□□ 1.16
MS4A1P11836 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC22.28■■□□□ 1.16
MS4A1P11836 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC22.28■■□□□ 1.16
MS4A1P11836 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
MS4A1P11836 AC091607.1-201ENST00000490318 1060 ntBASIC22.28■■□□□ 1.16
MS4A1P11836 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC22.28■■□□□ 1.16
MS4A1P11836 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC22.28■■□□□ 1.16
MS4A1P11836 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
MS4A1P11836 AP005901.3-202ENST00000581653 237 ntBASIC22.28■■□□□ 1.16
MS4A1P11836 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.28■■□□□ 1.16
MS4A1P11836 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
MS4A1P11836 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms