Protein–RNA interactions for Protein: P11831

SRF, Serum response factor, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFP11831 AC009118.2-201ENST00000613275 655 ntBASIC17.41■□□□□ 0.38
SRFP11831 AL662799.1-202ENST00000614205 422 ntBASIC17.41■□□□□ 0.38
SRFP11831 AC008267.7-201ENST00000624570 1194 ntBASIC17.41■□□□□ 0.38
SRFP11831 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.41■□□□□ 0.38
SRFP11831 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 GNAS-203ENST00000306120 1878 ntBASIC17.41■□□□□ 0.38
SRFP11831 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFP11831 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SRFP11831 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC17.41■□□□□ 0.38
SRFP11831 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFP11831 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFP11831 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFP11831 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFP11831 HNRNPRP1-201ENST00000453465 1695 ntBASIC17.4■□□□□ 0.38
SRFP11831 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.4■□□□□ 0.38
SRFP11831 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SRFP11831 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
SRFP11831 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.4■□□□□ 0.38
SRFP11831 NME2P1-201ENST00000426182 414 ntBASIC17.4■□□□□ 0.38
SRFP11831 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC17.4■□□□□ 0.38
SRFP11831 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SRFP11831 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.4■□□□□ 0.38
SRFP11831 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.4■□□□□ 0.38
SRFP11831 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SRFP11831 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.4■□□□□ 0.38
SRFP11831 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SRFP11831 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
SRFP11831 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.39■□□□□ 0.38
SRFP11831 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SRFP11831 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SRFP11831 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SRFP11831 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 REXO1L11P-201ENST00000620964 1927 ntBASIC17.39■□□□□ 0.37
SRFP11831 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFP11831 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.39■□□□□ 0.37
SRFP11831 AL596325.1-201ENST00000563991 1082 ntBASIC17.39■□□□□ 0.37
SRFP11831 AP000842.3-202ENST00000569238 1080 ntBASIC17.39■□□□□ 0.37
SRFP11831 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFP11831 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.39■□□□□ 0.37
SRFP11831 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.39■□□□□ 0.37
SRFP11831 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SRFP11831 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.38■□□□□ 0.37
SRFP11831 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.38■□□□□ 0.37
SRFP11831 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
SRFP11831 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.38■□□□□ 0.37
SRFP11831 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.38■□□□□ 0.37
SRFP11831 AC027307.2-201ENST00000591252 911 ntBASIC17.38■□□□□ 0.37
SRFP11831 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
SRFP11831 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.38■□□□□ 0.37
SRFP11831 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
SRFP11831 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.38■□□□□ 0.37
SRFP11831 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SRFP11831 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
SRFP11831 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRFP11831 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SRFP11831 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
SRFP11831 MIR346-201ENST00000362234 95 ntBASIC17.37■□□□□ 0.37
SRFP11831 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms