Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TOP2AP11388 MIR346-201ENST00000362234 95 ntBASIC29.98■■■□□ 2.39
TOP2AP11388 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
TOP2AP11388 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC29.98■■■□□ 2.39
TOP2AP11388 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC29.98■■■□□ 2.39
TOP2AP11388 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC29.98■■■□□ 2.39
TOP2AP11388 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC29.98■■■□□ 2.39
TOP2AP11388 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TOP2AP11388 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
TOP2AP11388 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC29.98■■■□□ 2.39
TOP2AP11388 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
TOP2AP11388 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC29.98■■■□□ 2.39
TOP2AP11388 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
TOP2AP11388 GAPDHP21-201ENST00000450301 1010 ntBASIC29.97■■■□□ 2.39
TOP2AP11388 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC29.97■■■□□ 2.39
TOP2AP11388 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
TOP2AP11388 AC097493.3-201ENST00000509725 367 ntBASIC29.97■■■□□ 2.39
TOP2AP11388 IGHV3-42-201ENST00000520410 361 ntBASIC29.97■■■□□ 2.39
TOP2AP11388 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC29.97■■■□□ 2.39
TOP2AP11388 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC29.97■■■□□ 2.39
TOP2AP11388 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC29.97■■■□□ 2.39
TOP2AP11388 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC29.97■■■□□ 2.39
TOP2AP11388 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC29.97■■■□□ 2.39
TOP2AP11388 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC29.97■■■□□ 2.39
TOP2AP11388 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
TOP2AP11388 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC29.97■■■□□ 2.39
TOP2AP11388 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
TOP2AP11388 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC29.97■■■□□ 2.39
TOP2AP11388 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC29.97■■■□□ 2.39
TOP2AP11388 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
TOP2AP11388 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
TOP2AP11388 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TOP2AP11388 IGHV3-62-201ENST00000520057 340 ntBASIC29.96■■■□□ 2.39
TOP2AP11388 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC29.96■■■□□ 2.39
TOP2AP11388 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC29.96■■■□□ 2.39
TOP2AP11388 SPDYE12P-201ENST00000618416 771 ntBASIC29.96■■■□□ 2.39
TOP2AP11388 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC29.96■■■□□ 2.39
TOP2AP11388 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC29.96■■■□□ 2.39
TOP2AP11388 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
TOP2AP11388 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC29.96■■■□□ 2.39
TOP2AP11388 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC29.96■■■□□ 2.39
TOP2AP11388 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC29.96■■■□□ 2.39
TOP2AP11388 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
TOP2AP11388 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC29.96■■■□□ 2.39
TOP2AP11388 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
TOP2AP11388 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
TOP2AP11388 AC027307.2-201ENST00000591252 911 ntBASIC29.96■■■□□ 2.39
TOP2AP11388 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC29.96■■■□□ 2.39
TOP2AP11388 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC29.96■■■□□ 2.39
TOP2AP11388 NARF-206ENST00000457415 1668 ntTSL 5 BASIC29.96■■■□□ 2.39
TOP2AP11388 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC29.96■■■□□ 2.39
TOP2AP11388 FOXO1B-201ENST00000504678 1527 ntBASIC29.95■■■□□ 2.39
TOP2AP11388 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
TOP2AP11388 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC29.95■■■□□ 2.39
TOP2AP11388 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC29.95■■■□□ 2.39
TOP2AP11388 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TOP2AP11388 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC29.95■■■□□ 2.38
TOP2AP11388 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
TOP2AP11388 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC29.95■■■□□ 2.38
TOP2AP11388 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC29.95■■■□□ 2.38
TOP2AP11388 SPDYE22P-201ENST00000582158 798 ntBASIC29.95■■■□□ 2.38
TOP2AP11388 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC29.95■■■□□ 2.38
TOP2AP11388 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC29.95■■■□□ 2.38
TOP2AP11388 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC29.95■■■□□ 2.38
TOP2AP11388 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.38
TOP2AP11388 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC29.94■■■□□ 2.38
TOP2AP11388 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC29.94■■■□□ 2.38
TOP2AP11388 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC29.94■■■□□ 2.38
TOP2AP11388 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
TOP2AP11388 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC29.94■■■□□ 2.38
TOP2AP11388 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
TOP2AP11388 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC29.94■■■□□ 2.38
TOP2AP11388 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
TOP2AP11388 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC29.94■■■□□ 2.38
TOP2AP11388 BICD1-207ENST00000551848 1962 ntBASIC29.94■■■□□ 2.38
TOP2AP11388 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC29.94■■■□□ 2.38
TOP2AP11388 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
TOP2AP11388 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
TOP2AP11388 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
TOP2AP11388 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
TOP2AP11388 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
TOP2AP11388 HLA-J-202ENST00000469281 1241 ntBASIC29.93■■■□□ 2.38
TOP2AP11388 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
TOP2AP11388 ABALON-201ENST00000629058 1903 ntBASIC29.93■■■□□ 2.38
TOP2AP11388 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
TOP2AP11388 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
TOP2AP11388 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC29.93■■■□□ 2.38
TOP2AP11388 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC29.93■■■□□ 2.38
TOP2AP11388 TDG-209ENST00000544861 1387 ntTSL 2 BASIC29.93■■■□□ 2.38
TOP2AP11388 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
TOP2AP11388 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC29.92■■■□□ 2.38
TOP2AP11388 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC29.92■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms