Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
FAM228BP0C875 AC124947.2-201ENST00000547118 1133 ntBASIC18.51■□□□□ 0.55
FAM228BP0C875 LINC01238-205ENST00000567549 1107 ntBASIC18.51■□□□□ 0.55
FAM228BP0C875 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
FAM228BP0C875 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
FAM228BP0C875 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
FAM228BP0C875 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM228BP0C875 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.51■□□□□ 0.55
FAM228BP0C875 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.5■□□□□ 0.55
FAM228BP0C875 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.5■□□□□ 0.55
FAM228BP0C875 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.5■□□□□ 0.55
FAM228BP0C875 AP005901.3-202ENST00000581653 237 ntBASIC18.5■□□□□ 0.55
FAM228BP0C875 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FAM228BP0C875 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM228BP0C875 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM228BP0C875 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM228BP0C875 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM228BP0C875 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.49■□□□□ 0.55
FAM228BP0C875 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM228BP0C875 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.49■□□□□ 0.55
FAM228BP0C875 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.49■□□□□ 0.55
FAM228BP0C875 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM228BP0C875 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 AC009336.1-201ENST00000608941 1553 ntBASIC18.49■□□□□ 0.55
FAM228BP0C875 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM228BP0C875 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM228BP0C875 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM228BP0C875 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
FAM228BP0C875 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 AC132938.5-201ENST00000624980 1813 ntBASIC18.49■□□□□ 0.55
FAM228BP0C875 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
FAM228BP0C875 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM228BP0C875 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FAM228BP0C875 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FAM228BP0C875 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.48■□□□□ 0.55
FAM228BP0C875 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
FAM228BP0C875 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
FAM228BP0C875 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.48■□□□□ 0.55
FAM228BP0C875 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
FAM228BP0C875 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
FAM228BP0C875 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.48■□□□□ 0.55
FAM228BP0C875 TMPOP1-202ENST00000424642 1267 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms