Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RETP07949 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
RETP07949 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.49■□□□□ 0.39
RETP07949 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.49■□□□□ 0.39
RETP07949 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RETP07949 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.49■□□□□ 0.39
RETP07949 AL020989.1-201ENST00000422979 469 ntBASIC17.49■□□□□ 0.39
RETP07949 AC103564.2-201ENST00000432853 1299 ntBASIC17.49■□□□□ 0.39
RETP07949 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.49■□□□□ 0.39
RETP07949 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RETP07949 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
RETP07949 LINC00896-202ENST00000609602 2128 ntBASIC17.49■□□□□ 0.39
RETP07949 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RETP07949 AL035252.4-201ENST00000624174 288 ntBASIC17.49■□□□□ 0.39
RETP07949 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.49■□□□□ 0.39
RETP07949 AC073592.5-201ENST00000624854 528 ntBASIC17.49■□□□□ 0.39
RETP07949 AF228730.6-201ENST00000641497 218 ntBASIC17.49■□□□□ 0.39
RETP07949 AC084121.3-201ENST00000641716 218 ntBASIC17.49■□□□□ 0.39
RETP07949 AC105233.6-201ENST00000642093 218 ntBASIC17.49■□□□□ 0.39
RETP07949 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 LINC01126-201ENST00000623515 1646 ntBASIC17.49■□□□□ 0.39
RETP07949 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 AC134043.2-201ENST00000624206 2238 ntBASIC17.49■□□□□ 0.39
RETP07949 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
RETP07949 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RETP07949 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.48■□□□□ 0.39
RETP07949 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 NCF1C-201ENST00000438382 1427 ntBASIC17.48■□□□□ 0.39
RETP07949 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.48■□□□□ 0.39
RETP07949 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 AC096633.1-201ENST00000422446 749 ntBASIC17.48■□□□□ 0.39
RETP07949 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.48■□□□□ 0.39
RETP07949 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.48■□□□□ 0.39
RETP07949 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.48■□□□□ 0.39
RETP07949 KRT19P2-202ENST00000557173 1012 ntBASIC17.48■□□□□ 0.39
RETP07949 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.48■□□□□ 0.39
RETP07949 AC005498.2-205ENST00000593218 784 ntBASIC17.48■□□□□ 0.39
RETP07949 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.48■□□□□ 0.39
RETP07949 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RETP07949 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.48■□□□□ 0.39
RETP07949 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RETP07949 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RETP07949 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.48■□□□□ 0.39
RETP07949 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RETP07949 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RETP07949 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.48■□□□□ 0.39
RETP07949 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RETP07949 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RETP07949 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
RETP07949 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RETP07949 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.47■□□□□ 0.39
RETP07949 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
RETP07949 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.47■□□□□ 0.39
RETP07949 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RETP07949 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.47■□□□□ 0.39
RETP07949 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.47■□□□□ 0.39
RETP07949 IGLL3P-201ENST00000412472 434 ntBASIC17.47■□□□□ 0.39
RETP07949 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.47■□□□□ 0.39
RETP07949 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.47■□□□□ 0.39
RETP07949 AC074386.1-202ENST00000463561 864 ntBASIC17.47■□□□□ 0.39
RETP07949 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 RNA5SP421-201ENST00000516864 134 ntBASIC17.47■□□□□ 0.39
RETP07949 AC069262.1-201ENST00000539058 672 ntBASIC17.47■□□□□ 0.39
RETP07949 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.47■□□□□ 0.39
RETP07949 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.47■□□□□ 0.39
RETP07949 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.47■□□□□ 0.39
RETP07949 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
RETP07949 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RETP07949 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms