Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGN1P05114 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGN1P05114 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
HMGN1P05114 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
HMGN1P05114 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HMGN1P05114 AC008894.3-201ENST00000624324 3103 ntBASIC15.77■□□□□ 0.11
HMGN1P05114 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HMGN1P05114 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGN1P05114 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGN1P05114 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGN1P05114 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HMGN1P05114 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 AP003733.1-201ENST00000491725 852 ntBASIC15.76■□□□□ 0.11
HMGN1P05114 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 IGHV3-52-201ENST00000519770 353 ntBASIC15.76■□□□□ 0.11
HMGN1P05114 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGN1P05114 ZNF444P1-201ENST00000559497 298 ntBASIC15.76■□□□□ 0.11
HMGN1P05114 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.76■□□□□ 0.11
HMGN1P05114 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGN1P05114 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
HMGN1P05114 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.76■□□□□ 0.11
HMGN1P05114 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
HMGN1P05114 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGN1P05114 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.76■□□□□ 0.11
HMGN1P05114 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HMGN1P05114 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HMGN1P05114 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.75■□□□□ 0.11
HMGN1P05114 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
HMGN1P05114 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
HMGN1P05114 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGN1P05114 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGN1P05114 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGN1P05114 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HMGN1P05114 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.75■□□□□ 0.11
HMGN1P05114 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HMGN1P05114 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HMGN1P05114 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGN1P05114 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGN1P05114 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
HMGN1P05114 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.74■□□□□ 0.11
HMGN1P05114 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
HMGN1P05114 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.74■□□□□ 0.11
HMGN1P05114 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 PCDHB19P-201ENST00000570871 2371 ntBASIC15.74■□□□□ 0.11
HMGN1P05114 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.74■□□□□ 0.11
HMGN1P05114 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HMGN1P05114 STARP1-201ENST00000397973 869 ntBASIC15.74■□□□□ 0.11
HMGN1P05114 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms