Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHGBP05060 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CHGBP05060 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.81■□□□□ 0.92
CHGBP05060 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 UNC93B6-202ENST00000528242 690 ntBASIC20.81■□□□□ 0.92
CHGBP05060 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CHGBP05060 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC20.81■□□□□ 0.92
CHGBP05060 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHGBP05060 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.8■□□□□ 0.92
CHGBP05060 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CHGBP05060 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.8■□□□□ 0.92
CHGBP05060 AC104109.2-201ENST00000602919 1418 ntBASIC20.8■□□□□ 0.92
CHGBP05060 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CHGBP05060 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.8■□□□□ 0.92
CHGBP05060 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC20.8■□□□□ 0.92
CHGBP05060 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC20.8■□□□□ 0.92
CHGBP05060 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHGBP05060 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CHGBP05060 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.8■□□□□ 0.92
CHGBP05060 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.8■□□□□ 0.92
CHGBP05060 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.8■□□□□ 0.92
CHGBP05060 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 RPL13AP23-201ENST00000480739 586 ntBASIC20.8■□□□□ 0.92
CHGBP05060 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
CHGBP05060 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.8■□□□□ 0.92
CHGBP05060 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC20.8■□□□□ 0.92
CHGBP05060 AC093525.9-201ENST00000624961 1746 ntBASIC20.8■□□□□ 0.92
CHGBP05060 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHGBP05060 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
CHGBP05060 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.79■□□□□ 0.92
CHGBP05060 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHGBP05060 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHGBP05060 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHGBP05060 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHGBP05060 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.79■□□□□ 0.92
CHGBP05060 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.79■□□□□ 0.92
CHGBP05060 ACTG1P4-201ENST00000425123 1122 ntBASIC20.79■□□□□ 0.92
CHGBP05060 AC009947.1-201ENST00000444350 727 ntBASIC20.79■□□□□ 0.92
CHGBP05060 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.79■□□□□ 0.92
CHGBP05060 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.79■□□□□ 0.92
CHGBP05060 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.79■□□□□ 0.92
CHGBP05060 COX5A-202ENST00000562233 441 ntTSL 3 BASIC20.79■□□□□ 0.92
CHGBP05060 AC034105.1-201ENST00000563488 319 ntBASIC20.79■□□□□ 0.92
CHGBP05060 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.79■□□□□ 0.92
CHGBP05060 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC20.79■□□□□ 0.92
CHGBP05060 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CHGBP05060 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHGBP05060 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.79■□□□□ 0.92
CHGBP05060 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
CHGBP05060 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHGBP05060 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHGBP05060 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHGBP05060 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CHGBP05060 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.78■□□□□ 0.92
CHGBP05060 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
CHGBP05060 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.78■□□□□ 0.92
CHGBP05060 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGBP05060 AC136632.2-201ENST00000512891 861 ntBASIC20.78■□□□□ 0.92
CHGBP05060 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHGBP05060 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.78■□□□□ 0.92
CHGBP05060 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.78■□□□□ 0.92
CHGBP05060 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CHGBP05060 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.78■□□□□ 0.92
CHGBP05060 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.78■□□□□ 0.92
CHGBP05060 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms