Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.61□□□□□ -0.07
CD74P04233 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD74P04233 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.61□□□□□ -0.07
CD74P04233 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 AC024563.2-201ENST00000603282 481 ntBASIC14.61□□□□□ -0.07
CD74P04233 FAM197Y4-202ENST00000622692 608 ntBASIC14.61□□□□□ -0.07
CD74P04233 AL157888.1-201ENST00000631930 593 ntBASIC14.61□□□□□ -0.07
CD74P04233 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.61□□□□□ -0.07
CD74P04233 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD74P04233 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CD74P04233 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CD74P04233 AL365203.3-201ENST00000609742 2057 ntBASIC14.61□□□□□ -0.07
CD74P04233 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.61□□□□□ -0.07
CD74P04233 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.6□□□□□ -0.07
CD74P04233 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CD74P04233 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.6□□□□□ -0.07
CD74P04233 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC14.6□□□□□ -0.07
CD74P04233 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC14.6□□□□□ -0.07
CD74P04233 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 AC009947.2-201ENST00000444014 672 ntBASIC14.6□□□□□ -0.07
CD74P04233 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC14.6□□□□□ -0.07
CD74P04233 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.6□□□□□ -0.07
CD74P04233 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.6□□□□□ -0.07
CD74P04233 AC113410.3-201ENST00000623366 203 ntBASIC14.6□□□□□ -0.07
CD74P04233 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.6□□□□□ -0.07
CD74P04233 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CD74P04233 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.6□□□□□ -0.07
CD74P04233 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CD74P04233 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.6□□□□□ -0.07
CD74P04233 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.6□□□□□ -0.07
CD74P04233 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CD74P04233 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CD74P04233 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CD74P04233 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.59□□□□□ -0.07
CD74P04233 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.59□□□□□ -0.07
CD74P04233 MYCLP1-201ENST00000372451 1075 ntBASIC14.59□□□□□ -0.07
CD74P04233 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CD74P04233 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC14.59□□□□□ -0.07
CD74P04233 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC14.59□□□□□ -0.07
CD74P04233 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms