Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 SPCS2P4-201ENST00000436160 681 ntBASIC21■□□□□ 0.95
COL4A1P02462 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC21■□□□□ 0.95
COL4A1P02462 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21■□□□□ 0.95
COL4A1P02462 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC21■□□□□ 0.95
COL4A1P02462 RARRES2P8-201ENST00000566335 367 ntBASIC21■□□□□ 0.95
COL4A1P02462 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC21■□□□□ 0.95
COL4A1P02462 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A1P02462 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A1P02462 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21■□□□□ 0.95
COL4A1P02462 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL4A1P02462 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC21■□□□□ 0.95
COL4A1P02462 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
COL4A1P02462 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL4A1P02462 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A1P02462 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21■□□□□ 0.95
COL4A1P02462 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC21■□□□□ 0.95
COL4A1P02462 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC21■□□□□ 0.95
COL4A1P02462 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
COL4A1P02462 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
COL4A1P02462 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 EGFEM1P-202ENST00000431685 1563 ntBASIC20.99■□□□□ 0.95
COL4A1P02462 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 SPDYE14P-201ENST00000442619 822 ntBASIC20.99■□□□□ 0.95
COL4A1P02462 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.99■□□□□ 0.95
COL4A1P02462 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
COL4A1P02462 VPS29-207ENST00000549970 818 ntTSL 3 BASIC20.99■□□□□ 0.95
COL4A1P02462 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC20.99■□□□□ 0.95
COL4A1P02462 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC20.99■□□□□ 0.95
COL4A1P02462 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.99■□□□□ 0.95
COL4A1P02462 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
COL4A1P02462 GNAS-203ENST00000306120 1878 ntBASIC20.99■□□□□ 0.95
COL4A1P02462 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 AC002056.1-201ENST00000395613 760 ntBASIC20.99■□□□□ 0.95
COL4A1P02462 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 AC004449.1-201ENST00000564240 433 ntBASIC20.99■□□□□ 0.95
COL4A1P02462 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.99■□□□□ 0.95
COL4A1P02462 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 AL645728.2-201ENST00000641974 660 ntBASIC20.99■□□□□ 0.95
COL4A1P02462 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
COL4A1P02462 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.99■□□□□ 0.95
COL4A1P02462 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.98■□□□□ 0.95
COL4A1P02462 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
COL4A1P02462 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 FST-202ENST00000396947 2538 ntTSL 5 BASIC20.98■□□□□ 0.95
COL4A1P02462 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
COL4A1P02462 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
COL4A1P02462 UGT1A2P-201ENST00000454886 866 ntBASIC20.98■□□□□ 0.95
COL4A1P02462 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
COL4A1P02462 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.98■□□□□ 0.95
COL4A1P02462 MIR4515-201ENST00000584082 81 ntBASIC20.98■□□□□ 0.95
COL4A1P02462 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.98■□□□□ 0.95
COL4A1P02462 AC015911.4-201ENST00000588022 1070 ntBASIC20.98■□□□□ 0.95
COL4A1P02462 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC20.98■□□□□ 0.95
COL4A1P02462 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
COL4A1P02462 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.98■□□□□ 0.95
COL4A1P02462 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A1P02462 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A1P02462 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A1P02462 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A1P02462 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
COL4A1P02462 CD99-202ENST00000381180 530 ntTSL 2 BASIC20.97■□□□□ 0.95
COL4A1P02462 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
COL4A1P02462 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms