Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 AC012313.10-201ENST00000623509 926 ntBASIC20.07■□□□□ 0.8
CTDNEP1O95476 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CTDNEP1O95476 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC20.07■□□□□ 0.8
CTDNEP1O95476 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 AC097637.2-201ENST00000624096 1997 ntBASIC20.06■□□□□ 0.8
CTDNEP1O95476 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 ACTG1P4-201ENST00000425123 1122 ntBASIC20.06■□□□□ 0.8
CTDNEP1O95476 BX005266.1-201ENST00000473402 457 ntBASIC20.06■□□□□ 0.8
CTDNEP1O95476 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 CA12-203ENST00000422263 2556 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.06■□□□□ 0.8
CTDNEP1O95476 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CTDNEP1O95476 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTDNEP1O95476 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTDNEP1O95476 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTDNEP1O95476 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 AC078925.2-201ENST00000624013 1973 ntBASIC20.05■□□□□ 0.8
CTDNEP1O95476 AKR1C7P-201ENST00000305623 895 ntBASIC20.05■□□□□ 0.8
CTDNEP1O95476 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTDNEP1O95476 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CTDNEP1O95476 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.05■□□□□ 0.8
CTDNEP1O95476 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CTDNEP1O95476 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 LINC00982-205ENST00000420957 435 ntBASIC20.04■□□□□ 0.8
CTDNEP1O95476 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 DUX4L17-201ENST00000557360 1267 ntBASIC20.04■□□□□ 0.8
CTDNEP1O95476 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 NKAPP1-205ENST00000585790 367 ntBASIC20.04■□□□□ 0.8
CTDNEP1O95476 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 GPR89P-201ENST00000407924 1495 ntBASIC20.04■□□□□ 0.8
CTDNEP1O95476 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.04■□□□□ 0.8
CTDNEP1O95476 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CTDNEP1O95476 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.03■□□□□ 0.8
CTDNEP1O95476 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.03■□□□□ 0.8
CTDNEP1O95476 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CTDNEP1O95476 PRYP5-201ENST00000451909 266 ntBASIC20.03■□□□□ 0.8
CTDNEP1O95476 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
CTDNEP1O95476 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.03■□□□□ 0.8
CTDNEP1O95476 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.03■□□□□ 0.8
CTDNEP1O95476 METTL23-204ENST00000586752 904 ntTSL 2 BASIC20.03■□□□□ 0.8
CTDNEP1O95476 AC064862.7-201ENST00000604520 867 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms