Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
SCAF4O95104 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.29□□□□□ -0.12
SCAF4O95104 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCAF4O95104 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCAF4O95104 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SCAF4O95104 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC14.29□□□□□ -0.12
SCAF4O95104 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCAF4O95104 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SCAF4O95104 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.28□□□□□ -0.12
SCAF4O95104 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
SCAF4O95104 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.28□□□□□ -0.12
SCAF4O95104 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC14.28□□□□□ -0.12
SCAF4O95104 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
SCAF4O95104 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
SCAF4O95104 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.28□□□□□ -0.12
SCAF4O95104 LINC01023-201ENST00000606054 436 ntBASIC14.28□□□□□ -0.12
SCAF4O95104 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.28□□□□□ -0.12
SCAF4O95104 AC116562.4-202ENST00000641738 218 ntBASIC14.28□□□□□ -0.12
SCAF4O95104 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
SCAF4O95104 AL365209.1-201ENST00000624418 6473 ntBASIC14.28□□□□□ -0.12
SCAF4O95104 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
SCAF4O95104 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
SCAF4O95104 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
SCAF4O95104 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.27□□□□□ -0.12
SCAF4O95104 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SCAF4O95104 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SCAF4O95104 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
SCAF4O95104 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.27□□□□□ -0.12
SCAF4O95104 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
SCAF4O95104 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.27□□□□□ -0.12
SCAF4O95104 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SCAF4O95104 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SCAF4O95104 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SCAF4O95104 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCAF4O95104 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCAF4O95104 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.27□□□□□ -0.13
SCAF4O95104 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC14.27□□□□□ -0.13
SCAF4O95104 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCAF4O95104 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.27□□□□□ -0.13
SCAF4O95104 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC14.27□□□□□ -0.13
SCAF4O95104 ECEL1P2-202ENST00000465689 757 ntBASIC14.27□□□□□ -0.13
SCAF4O95104 AC128688.1-201ENST00000487626 519 ntBASIC14.27□□□□□ -0.13
SCAF4O95104 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC14.27□□□□□ -0.13
SCAF4O95104 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
SCAF4O95104 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.27□□□□□ -0.13
SCAF4O95104 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.27□□□□□ -0.13
SCAF4O95104 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC14.27□□□□□ -0.13
SCAF4O95104 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SCAF4O95104 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SCAF4O95104 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SCAF4O95104 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SCAF4O95104 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
SCAF4O95104 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms