Protein–RNA interactions for Protein: O75871

CEACAM4, Carcinoembryonic antigen-related cell adhesion molecule 4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM4O75871 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.64■□□□□ 0.09
CEACAM4O75871 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CEACAM4O75871 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.64■□□□□ 0.09
CEACAM4O75871 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CEACAM4O75871 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CEACAM4O75871 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CEACAM4O75871 PMS2P4-201ENST00000412466 1052 ntBASIC15.64■□□□□ 0.09
CEACAM4O75871 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CEACAM4O75871 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CEACAM4O75871 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.64■□□□□ 0.09
CEACAM4O75871 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.64■□□□□ 0.09
CEACAM4O75871 TNXA-203ENST00000507684 2038 ntBASIC15.64■□□□□ 0.09
CEACAM4O75871 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CEACAM4O75871 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.64■□□□□ 0.09
CEACAM4O75871 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.64■□□□□ 0.09
CEACAM4O75871 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.64■□□□□ 0.09
CEACAM4O75871 DUX4L17-201ENST00000557360 1267 ntBASIC15.64■□□□□ 0.09
CEACAM4O75871 KRT8P23-201ENST00000560090 1207 ntBASIC15.64■□□□□ 0.09
CEACAM4O75871 LINC01225-203ENST00000563550 1244 ntBASIC15.64■□□□□ 0.09
CEACAM4O75871 LINC00304-203ENST00000565008 1864 ntBASIC15.64■□□□□ 0.09
CEACAM4O75871 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.64■□□□□ 0.09
CEACAM4O75871 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.64■□□□□ 0.09
CEACAM4O75871 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.64■□□□□ 0.09
CEACAM4O75871 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.64■□□□□ 0.09
CEACAM4O75871 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
CEACAM4O75871 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CEACAM4O75871 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CEACAM4O75871 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.63■□□□□ 0.09
CEACAM4O75871 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CEACAM4O75871 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 AC055876.3-201ENST00000431496 288 ntBASIC15.63■□□□□ 0.09
CEACAM4O75871 SPCS2P4-201ENST00000436160 681 ntBASIC15.63■□□□□ 0.09
CEACAM4O75871 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC15.63■□□□□ 0.09
CEACAM4O75871 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.63■□□□□ 0.09
CEACAM4O75871 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.63■□□□□ 0.09
CEACAM4O75871 AC109635.5-201ENST00000533593 962 ntBASIC15.63■□□□□ 0.09
CEACAM4O75871 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 AC239800.4-201ENST00000603712 296 ntBASIC15.63■□□□□ 0.09
CEACAM4O75871 AL009183.1-201ENST00000603760 355 ntBASIC15.63■□□□□ 0.09
CEACAM4O75871 AC138649.4-201ENST00000612222 287 ntBASIC15.63■□□□□ 0.09
CEACAM4O75871 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CEACAM4O75871 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CEACAM4O75871 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC15.63■□□□□ 0.09
CEACAM4O75871 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CEACAM4O75871 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC15.62■□□□□ 0.09
CEACAM4O75871 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CEACAM4O75871 AC120498.9-201ENST00000339021 3867 ntBASIC15.62■□□□□ 0.09
CEACAM4O75871 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CEACAM4O75871 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.62■□□□□ 0.09
CEACAM4O75871 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CEACAM4O75871 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CEACAM4O75871 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CEACAM4O75871 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CEACAM4O75871 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.62■□□□□ 0.09
CEACAM4O75871 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.62■□□□□ 0.09
CEACAM4O75871 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.62■□□□□ 0.09
CEACAM4O75871 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CEACAM4O75871 AC093214.1-201ENST00000511688 1107 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms