Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.44■□□□□ 0.38
GPC4O75487 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC4O75487 TOB2P1-201ENST00000469761 992 ntBASIC17.44■□□□□ 0.38
GPC4O75487 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC4O75487 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC4O75487 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC4O75487 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.44■□□□□ 0.38
GPC4O75487 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
GPC4O75487 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC4O75487 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC4O75487 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.44■□□□□ 0.38
GPC4O75487 AL138688.1-201ENST00000624851 1594 ntBASIC17.44■□□□□ 0.38
GPC4O75487 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
GPC4O75487 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
GPC4O75487 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 PKD1P5-201ENST00000532415 10291 ntBASIC17.43■□□□□ 0.38
GPC4O75487 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC4O75487 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC4O75487 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC4O75487 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 AC133963.1-201ENST00000504166 1679 ntBASIC17.43■□□□□ 0.38
GPC4O75487 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
GPC4O75487 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC4O75487 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.43■□□□□ 0.38
GPC4O75487 VENTXP7-201ENST00000475503 772 ntBASIC17.43■□□□□ 0.38
GPC4O75487 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.43■□□□□ 0.38
GPC4O75487 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.43■□□□□ 0.38
GPC4O75487 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.43■□□□□ 0.38
GPC4O75487 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 AC093458.2-201ENST00000623150 629 ntBASIC17.43■□□□□ 0.38
GPC4O75487 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.43■□□□□ 0.38
GPC4O75487 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
GPC4O75487 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
GPC4O75487 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 AC010460.3-201ENST00000511359 1579 ntBASIC17.42■□□□□ 0.38
GPC4O75487 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 IGHV3-47-201ENST00000425060 335 ntBASIC17.42■□□□□ 0.38
GPC4O75487 LINC00265-3P-201ENST00000447588 903 ntBASIC17.42■□□□□ 0.38
GPC4O75487 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
GPC4O75487 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.42■□□□□ 0.38
GPC4O75487 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.42■□□□□ 0.38
GPC4O75487 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.42■□□□□ 0.38
GPC4O75487 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.42■□□□□ 0.38
GPC4O75487 AC092329.2-201ENST00000598402 547 ntBASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms