Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF253O75346 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF253O75346 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF253O75346 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF253O75346 CROCCP2-202ENST00000412962 2773 ntBASIC13.59□□□□□ -0.23
ZNF253O75346 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF253O75346 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF253O75346 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
ZNF253O75346 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
ZNF253O75346 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
ZNF253O75346 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.58□□□□□ -0.23
ZNF253O75346 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF253O75346 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF253O75346 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
ZNF253O75346 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
ZNF253O75346 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF253O75346 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.58□□□□□ -0.24
ZNF253O75346 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.58□□□□□ -0.24
ZNF253O75346 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 KRT89P-201ENST00000620027 1478 ntBASIC13.58□□□□□ -0.24
ZNF253O75346 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC13.58□□□□□ -0.24
ZNF253O75346 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ZNF253O75346 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
ZNF253O75346 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
ZNF253O75346 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
ZNF253O75346 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
ZNF253O75346 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.58□□□□□ -0.24
ZNF253O75346 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
ZNF253O75346 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
ZNF253O75346 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ZNF253O75346 AL365209.1-201ENST00000624418 6473 ntBASIC13.57□□□□□ -0.24
ZNF253O75346 AC106886.4-201ENST00000623557 2502 ntBASIC13.57□□□□□ -0.24
ZNF253O75346 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 PBK-203ENST00000522944 1499 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
ZNF253O75346 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ZNF253O75346 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF253O75346 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
ZNF253O75346 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.57□□□□□ -0.24
ZNF253O75346 MIR1238-201ENST00000408483 83 ntBASIC13.57□□□□□ -0.24
ZNF253O75346 KRT18P65-201ENST00000439811 1286 ntBASIC13.57□□□□□ -0.24
ZNF253O75346 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.57□□□□□ -0.24
ZNF253O75346 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.57□□□□□ -0.24
ZNF253O75346 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC13.57□□□□□ -0.24
ZNF253O75346 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.57□□□□□ -0.24
ZNF253O75346 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
ZNF253O75346 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 KRT17P2-201ENST00000300992 1314 ntBASIC13.57□□□□□ -0.24
ZNF253O75346 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
ZNF253O75346 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms