Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
HCN1O60741 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HCN1O60741 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.27■□□□□ 0.2
HCN1O60741 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.27■□□□□ 0.2
HCN1O60741 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.27■□□□□ 0.2
HCN1O60741 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
HCN1O60741 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.27■□□□□ 0.2
HCN1O60741 BNIP3P18-201ENST00000593976 575 ntBASIC16.27■□□□□ 0.2
HCN1O60741 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.27■□□□□ 0.2
HCN1O60741 AC114341.1-201ENST00000618070 349 ntBASIC16.27■□□□□ 0.2
HCN1O60741 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.27■□□□□ 0.2
HCN1O60741 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HCN1O60741 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.27■□□□□ 0.2
HCN1O60741 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.27■□□□□ 0.19
HCN1O60741 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.27■□□□□ 0.19
HCN1O60741 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCN1O60741 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.27■□□□□ 0.19
HCN1O60741 AL355312.1-201ENST00000407115 2176 ntBASIC16.27■□□□□ 0.19
HCN1O60741 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.27■□□□□ 0.19
HCN1O60741 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCN1O60741 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HCN1O60741 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.27■□□□□ 0.19
HCN1O60741 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.27■□□□□ 0.19
HCN1O60741 AL023806.1-201ENST00000603994 1649 ntBASIC16.27■□□□□ 0.19
HCN1O60741 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.26■□□□□ 0.19
HCN1O60741 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.26■□□□□ 0.19
HCN1O60741 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HCN1O60741 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.26■□□□□ 0.19
HCN1O60741 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
HCN1O60741 AC100803.2-201ENST00000562459 1963 ntBASIC16.26■□□□□ 0.19
HCN1O60741 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
HCN1O60741 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 AC009533.2-201ENST00000543664 586 ntBASIC16.26■□□□□ 0.19
HCN1O60741 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.26■□□□□ 0.19
HCN1O60741 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.26■□□□□ 0.19
HCN1O60741 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
HCN1O60741 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.26■□□□□ 0.19
HCN1O60741 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.26■□□□□ 0.19
HCN1O60741 AC116407.2-201ENST00000613639 860 ntBASIC16.26■□□□□ 0.19
HCN1O60741 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HCN1O60741 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 AC133963.1-201ENST00000504166 1679 ntBASIC16.26■□□□□ 0.19
HCN1O60741 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HCN1O60741 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
HCN1O60741 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.26■□□□□ 0.19
HCN1O60741 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.26■□□□□ 0.19
HCN1O60741 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HCN1O60741 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HCN1O60741 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.26■□□□□ 0.19
HCN1O60741 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.25■□□□□ 0.19
HCN1O60741 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
HCN1O60741 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.25■□□□□ 0.19
HCN1O60741 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.25■□□□□ 0.19
HCN1O60741 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.25■□□□□ 0.19
HCN1O60741 SAPCD2P3-201ENST00000455031 850 ntBASIC16.25■□□□□ 0.19
HCN1O60741 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.25■□□□□ 0.19
HCN1O60741 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.25■□□□□ 0.19
HCN1O60741 AC096582.2-201ENST00000510860 516 ntBASIC16.25■□□□□ 0.19
HCN1O60741 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.25■□□□□ 0.19
HCN1O60741 AL160237.2-201ENST00000556165 472 ntBASIC16.25■□□□□ 0.19
HCN1O60741 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.25■□□□□ 0.19
HCN1O60741 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.25■□□□□ 0.19
HCN1O60741 MIR5100-201ENST00000579544 119 ntBASIC16.25■□□□□ 0.19
HCN1O60741 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HCN1O60741 AL591684.3-201ENST00000605187 298 ntBASIC16.25■□□□□ 0.19
HCN1O60741 REXO1L6P-202ENST00000619970 1078 ntBASIC16.25■□□□□ 0.19
HCN1O60741 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms