Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 FAM220CP-201ENST00000395253 831 ntBASIC15.4■□□□□ 0.06
SGCEO43556 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.4■□□□□ 0.06
SGCEO43556 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.4■□□□□ 0.06
SGCEO43556 AC009533.2-201ENST00000543664 586 ntBASIC15.4■□□□□ 0.06
SGCEO43556 TPM1-226ENST00000560959 925 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 TPSP2-201ENST00000561760 610 ntBASIC15.4■□□□□ 0.06
SGCEO43556 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.4■□□□□ 0.06
SGCEO43556 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.4■□□□□ 0.06
SGCEO43556 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.4■□□□□ 0.06
SGCEO43556 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.4■□□□□ 0.06
SGCEO43556 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.4■□□□□ 0.06
SGCEO43556 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
SGCEO43556 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.4■□□□□ 0.06
SGCEO43556 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SGCEO43556 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 AL023806.1-201ENST00000603994 1649 ntBASIC15.39■□□□□ 0.05
SGCEO43556 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SGCEO43556 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.39■□□□□ 0.05
SGCEO43556 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.39■□□□□ 0.05
SGCEO43556 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.39■□□□□ 0.05
SGCEO43556 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SGCEO43556 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.39■□□□□ 0.05
SGCEO43556 AP002383.4-201ENST00000442518 975 ntBASIC15.39■□□□□ 0.05
SGCEO43556 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.39■□□□□ 0.05
SGCEO43556 LINC00265-3P-201ENST00000447588 903 ntBASIC15.39■□□□□ 0.05
SGCEO43556 TOB2P1-201ENST00000469761 992 ntBASIC15.39■□□□□ 0.05
SGCEO43556 AC091607.1-201ENST00000490318 1060 ntBASIC15.39■□□□□ 0.05
SGCEO43556 AC122714.2-201ENST00000502787 707 ntBASIC15.39■□□□□ 0.05
SGCEO43556 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.39■□□□□ 0.05
SGCEO43556 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.39■□□□□ 0.05
SGCEO43556 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SGCEO43556 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.39■□□□□ 0.05
SGCEO43556 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SGCEO43556 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SGCEO43556 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.39■□□□□ 0.05
SGCEO43556 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SGCEO43556 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SGCEO43556 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SGCEO43556 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.38■□□□□ 0.05
SGCEO43556 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.38■□□□□ 0.05
SGCEO43556 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.38■□□□□ 0.05
SGCEO43556 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.38■□□□□ 0.05
SGCEO43556 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.38■□□□□ 0.05
SGCEO43556 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SGCEO43556 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.38■□□□□ 0.05
SGCEO43556 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SGCEO43556 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SGCEO43556 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms